Conservation of cofitness between HSERO_RS18350 and HSERO_RS11465 in Herbaspirillum seropedicae SmR1

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS18350 CoA transferase 1.0 HSERO_RS11465 sodium:proton antiporter 0.26 15
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS22280 CaiB/BaiF CoA-transferase family protein 0.48 QEN71_RS19280 Na+/H+ antiporter NhaA low > 153
Pseudomonas fluorescens GW456-L13 0.60 PfGW456L13_1728 L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16) 0.48 PfGW456L13_4617 Na+/H+ antiporter NhaA type — —
Pseudomonas putida KT2440 0.59 PP_1475 CAIB/BAIF family protein 0.48 PP_1132 Na(+)/H(+) antiporter NhaA 1 low > 96
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_3018 L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16) 0.47 Pf1N1B4_3202 Na+/H+ antiporter NhaA type — —
Pseudomonas fluorescens SBW25 0.59 PFLU_RS24525 CoA transferase 0.49 PFLU_RS06575 Na+/H+ antiporter NhaA — —
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS24525 CoA transferase 0.49 PFLU_RS06575 Na+/H+ antiporter NhaA — —
Pseudomonas sp. RS175 0.59 PFR28_00337 Succinyl-CoA--L-malate CoA-transferase beta subunit 0.49 PFR28_00526 Na(+)/H(+) antiporter NhaA — —
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_04330 CoA-transferase 0.48 AO353_17055 sodium:proton antiporter — —
Pseudomonas fluorescens FW300-N2C3 0.59 AO356_06355 CoA-transferase 0.48 AO356_05390 sodium:proton antiporter — —
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_3139 L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16) 0.48 Pf6N2E2_2937 Na+/H+ antiporter NhaA type — —
Pseudomonas simiae WCS417 0.58 PS417_22865 CoA-transferase 0.49 PS417_06545 pH-dependent sodium/proton antiporter — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_1590 L-carnitine dehydratase/bile acid-inducible protein F 0.45 Psyr_4210 sodium/proton antiporter, NhaA family — —
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_1590 L-carnitine dehydratase/bile acid-inducible protein F 0.45 Psyr_4210 sodium/proton antiporter, NhaA family — —
Caulobacter crescentus NA1000 0.44 CCNA_03677 CoA-transferase family III protein 0.44 CCNA_00459 Na+/H+ antiporter nhaA low > 66
Caulobacter crescentus NA1000 Δfur 0.44 CCNA_03677 CoA-transferase family III protein 0.44 CCNA_00459 Na+/H+ antiporter nhaA low > 67
Rhodospirillum rubrum S1H 0.36 Rru_A2550 L-carnitine dehydratase/bile acid-inducible protein F (NCBI) 0.48 Rru_A0128 Na+/H+ antiporter NhaA (NCBI) low > 58
Magnetospirillum magneticum AMB-1 0.35 AMB_RS10775 CoA transferase 0.45 AMB_RS12285 Na+/H+ antiporter NhaA — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF5846 L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16) 0.32 GFF4701 Na+/H+ antiporter NhaA type low > 90
Azospirillum brasilense Sp245 0.27 AZOBR_RS19675 CoA transferase 0.43 AZOBR_RS12965 sodium:proton antiporter low > 97
Azospirillum sp. SherDot2 0.27 MPMX19_04918 Acetyl-CoA:oxalate CoA-transferase 0.48 MPMX19_02315 Na(+)/H(+) antiporter NhaA low > 112
Rhizobium sp. OAE497 0.25 ABIE40_RS11980 CaiB/BaiF CoA-transferase family protein 0.38 ABIE40_RS27960 Na+/H+ antiporter NhaA low > 107
Escherichia coli ECRC99 0.24 KEDOAH_05805 yfdE CoA:oxalate CoA-transferase 0.47 KEDOAH_17125 nhaA Na+/H+ antiporter NhaA — —
Escherichia coli ECRC98 0.24 JDDGAC_26380 yfdE CoA:oxalate CoA-transferase 0.47 JDDGAC_14625 nhaA Na+/H+ antiporter NhaA low > 86
Sphingomonas koreensis DSMZ 15582 0.24 Ga0059261_2807 Predicted acyl-CoA transferases/carnitine dehydratase 0.39 Ga0059261_2282 sodium/proton antiporter, NhaA family (TC 2.A.33.1.1) — —
Escherichia coli Nissle 1917 0.24 ECOLIN_RS13645 CoA:oxalate CoA-transferase 0.49 ECOLIN_RS00105 Na+/H+ antiporter NhaA — —
Escherichia coli ECOR38 0.24 HEPCGN_21625 yfdE CoA:oxalate CoA-transferase 0.47 HEPCGN_09015 nhaA Na+/H+ antiporter NhaA low > 87
Sinorhizobium meliloti 1021 0.24 SM_b21182 hypothetical protein 0.27 SMa1913 Na+/H+ antiporter low > 103
Bosea sp. OAE506 0.22 ABIE41_RS23885 CaiB/BaiF CoA-transferase family protein 0.47 ABIE41_RS19785 Na+/H+ antiporter NhaA low > 77
Dickeya dianthicola ME23 0.21 DZA65_RS00105 formyl-CoA transferase 0.45 DZA65_RS19435 Na+/H+ antiporter NhaA — —
Dickeya dianthicola 67-19 0.20 HGI48_RS00090 formyl-CoA transferase 0.44 HGI48_RS18295 Na+/H+ antiporter NhaA — —
Dickeya dadantii 3937 0.20 DDA3937_RS21175 formyl-CoA transferase 0.45 DDA3937_RS18360 Na+/H+ antiporter NhaA — —
Escherichia coli ECRC100 0.20 OKFHMN_22400 frc formyl-CoA transferase 0.47 OKFHMN_11030 nhaA Na+/H+ antiporter NhaA low > 80
Escherichia coli ECRC102 0.20 NIAGMN_20175 frc formyl-CoA transferase 0.47 NIAGMN_08880 nhaA Na+/H+ antiporter NhaA — —
Escherichia coli ECRC101 0.20 MCAODC_12930 frc formyl-CoA transferase 0.47 MCAODC_01545 nhaA Na+/H+ antiporter NhaA low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.15 GFF208 Crotonobetainyl-CoA:carnitine CoA-transferase (EC 2.8.3.-) 0.47 GFF1119 Na+/H+ antiporter NhaA type low > 78
Shewanella loihica PV-4 0.15 Shew_2674 crotonobetainyl-CoA:carnitine CoA-transferase (RefSeq) 0.45 Shew_1042 Na+/H+ antiporter NhaA (RefSeq) low > 60

Not shown: 23 genomes with orthologs for HSERO_RS18350 only; 29 genomes with orthologs for HSERO_RS11465 only