Conservation of cofitness between HSERO_RS06810 and HSERO_RS10295 in Herbaspirillum seropedicae SmR1

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS06810 hemolysin D 1.0 HSERO_RS10295 ATP synthase 0.33 17
Xanthomonas campestris pv. campestris strain 8004 0.61 Xcc-8004.1793.1 RND efflux system, membrane fusion protein CmeA 0.51 Xcc-8004.2812.1 Flagellum-specific ATP synthase FliI low > 74
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS18280 efflux RND transporter periplasmic adaptor subunit 0.54 ABZR86_RS20185 flagellar protein export ATPase FliI low > 74
Ralstonia solanacearum UW163 0.58 UW163_RS19385 efflux RND transporter periplasmic adaptor subunit 0.63 UW163_RS17615 flagellum-specific ATP synthase FliI — —
Ralstonia solanacearum IBSBF1503 0.58 RALBFv3_RS19790 efflux RND transporter periplasmic adaptor subunit 0.63 RALBFv3_RS21575 flagellum-specific ATP synthase FliI low > 76
Ralstonia solanacearum PSI07 0.57 RPSI07_RS03395 efflux RND transporter periplasmic adaptor subunit 0.63 RPSI07_RS01550 flagellum-specific ATP synthase FliI low > 81
Ralstonia solanacearum GMI1000 0.57 RS_RS21035 efflux RND transporter periplasmic adaptor subunit 0.64 RS_RS19050 flagellum-specific ATP synthase FliI low > 80
Serratia liquefaciens MT49 0.49 IAI46_05190 multidrug efflux RND transporter periplasmic adaptor subunit SdeX 0.58 IAI46_15855 flagellum-specific ATP synthase FliI low > 86
Pantoea sp. MT58 0.48 IAI47_14510 efflux RND transporter periplasmic adaptor subunit 0.63 IAI47_08015 flagellum-specific ATP synthase FliI low > 76
Escherichia fergusonii Becca 0.48 EFB2_00559 Multidrug export protein AcrE 0.59 EFB2_02005 Flagellum-specific ATP synthase low > 86
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_4007 Secretion protein HlyD 0.55 Psyr_3454 ATPase FliI/YscN low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_4007 Secretion protein HlyD 0.55 Psyr_3454 ATPase FliI/YscN low > 86
Erwinia tracheiphila SCR3 0.47 LU632_RS18180 efflux RND transporter periplasmic adaptor subunit 0.61 LU632_RS10560 fliI flagellum-specific ATP synthase FliI — —
Dickeya dadantii 3937 0.47 DDA3937_RS05740 efflux RND transporter periplasmic adaptor subunit 0.58 DDA3937_RS13380 flagellum-specific ATP synthase FliI low > 74
Escherichia coli ECOR38 0.47 HEPCGN_16480 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.59 HEPCGN_04060 fliI flagellum-specific ATP synthase FliI low > 87
Escherichia coli Nissle 1917 0.47 ECOLIN_RS18750 multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.59 ECOLIN_RS11075 flagellar protein export ATPase FliI — —
Rahnella sp. WP5 0.47 EX31_RS22475 efflux RND transporter periplasmic adaptor subunit 0.56 EX31_RS09555 flagellum-specific ATP synthase FliI 0.45 31
Enterobacter sp. TBS_079 0.47 MPMX20_01065 Multidrug efflux pump subunit AcrA 0.59 MPMX20_02938 Flagellum-specific ATP synthase low > 85
Escherichia coli ECOR27 0.46 NOLOHH_09445 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.59 NOLOHH_16330 fliI flagellum-specific ATP synthase FliI low > 75
Escherichia coli BW25113 0.46 b3265 acrE cytoplasmic membrane lipoprotein (NCBI) 0.59 b1941 fliI flagellum-specific ATP synthase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_00440 Multidrug export protein AcrE 0.59 OHPLBJKB_01788 Flagellum-specific ATP synthase low > 73
Escherichia coli ECRC98 0.46 JDDGAC_21285 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.59 JDDGAC_00285 fliI flagellum-specific ATP synthase FliI low > 86
Escherichia coli ECRC101 0.46 MCAODC_08180 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.59 MCAODC_19695 fliI flagellum-specific ATP synthase FliI low > 87
Escherichia coli ECRC99 0.46 KEDOAH_10490 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.59 KEDOAH_02395 fliI flagellum-specific ATP synthase FliI — —
Escherichia coli ECRC100 0.46 OKFHMN_17660 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.59 OKFHMN_25700 fliI flagellum-specific ATP synthase FliI low > 80
Escherichia coli ECRC102 0.46 NIAGMN_15420 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.59 NIAGMN_02355 fliI flagellum-specific ATP synthase FliI — —
Escherichia coli ECRC62 0.46 BNILDI_02075 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.59 BNILDI_15120 fliI flagellum-specific ATP synthase FliI low > 75
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS06810 efflux RND transporter periplasmic adaptor subunit 0.55 PFLU_RS21760 flagellar protein export ATPase FliI low > 109
Pseudomonas fluorescens SBW25 0.46 PFLU_RS06810 efflux RND transporter periplasmic adaptor subunit 0.55 PFLU_RS21760 flagellar protein export ATPase FliI 0.58 106
Dickeya dianthicola ME23 0.46 DZA65_RS06120 efflux RND transporter periplasmic adaptor subunit 0.59 DZA65_RS13910 flagellum-specific ATP synthase FliI low > 75
Pectobacterium carotovorum WPP14 0.46 HER17_RS15735 efflux RND transporter periplasmic adaptor subunit 0.62 HER17_RS08265 flagellum-specific ATP synthase FliI low > 75
Enterobacter asburiae PDN3 0.46 EX28DRAFT_2495 RND family efflux transporter, MFP subunit 0.60 EX28DRAFT_0613 flagellar protein export ATPase FliI low > 76
Dickeya dianthicola 67-19 0.46 HGI48_RS05795 efflux RND transporter periplasmic adaptor subunit 0.59 HGI48_RS13425 flagellum-specific ATP synthase FliI low > 71
Pseudomonas sp. RS175 0.45 PFR28_00632 putative efflux pump periplasmic linker TtgA 0.54 PFR28_00835 Flagellum-specific ATP synthase low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF2117 RND efflux system, membrane fusion protein CmeA 0.61 GFF4015 Flagellum-specific ATP synthase FliI low > 78
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS34600 hemolysin D 0.65 BPHYT_RS18790 ATP synthase low > 109
Rhodopseudomonas palustris CGA009 0.43 TX73_012250 efflux RND transporter periplasmic adaptor subunit 0.36 TX73_008390 flagellar protein export ATPase FliI low > 86
Sphingomonas koreensis DSMZ 15582 0.41 Ga0059261_0560 RND family efflux transporter, MFP subunit 0.41 Ga0059261_2069 ATPase, FliI/YscN family low > 68

Not shown: 2 genomes with orthologs for HSERO_RS06810 only; 41 genomes with orthologs for HSERO_RS10295 only