Conservation of cofitness between HSERO_RS06810 and HSERO_RS10215 in Herbaspirillum seropedicae SmR1

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS06810 hemolysin D 1.0 HSERO_RS10215 flagellar P-ring protein FlgI 0.34 13
Xanthomonas campestris pv. campestris strain 8004 0.61 Xcc-8004.1793.1 RND efflux system, membrane fusion protein CmeA 0.50 Xcc-8004.2786.1 Flagellar P-ring protein FlgI low > 74
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS18280 efflux RND transporter periplasmic adaptor subunit 0.46 ABZR86_RS20110 flagellar basal body P-ring protein FlgI low > 74
Ralstonia solanacearum UW163 0.58 UW163_RS19385 efflux RND transporter periplasmic adaptor subunit 0.59 UW163_RS17480 flagellar basal body P-ring protein FlgI — —
Ralstonia solanacearum IBSBF1503 0.58 RALBFv3_RS19790 efflux RND transporter periplasmic adaptor subunit 0.59 RALBFv3_RS21705 flagellar basal body P-ring protein FlgI low > 76
Ralstonia solanacearum PSI07 0.57 RPSI07_RS03395 efflux RND transporter periplasmic adaptor subunit 0.59 RPSI07_RS01425 flagellar basal body P-ring protein FlgI low > 81
Ralstonia solanacearum GMI1000 0.57 RS_RS21035 efflux RND transporter periplasmic adaptor subunit 0.59 RS_RS18830 flagellar P-ring protein FlgI low > 80
Serratia liquefaciens MT49 0.49 IAI46_05190 multidrug efflux RND transporter periplasmic adaptor subunit SdeX 0.54 IAI46_15925 flagellar basal body P-ring protein FlgI low > 86
Pantoea sp. MT58 0.48 IAI47_14510 efflux RND transporter periplasmic adaptor subunit 0.46 IAI47_12130 flagellar basal body P-ring protein FlgI low > 76
Escherichia fergusonii Becca 0.48 EFB2_00559 Multidrug export protein AcrE 0.48 EFB2_02894 Flagellar P-ring protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_4007 Secretion protein HlyD 0.52 Psyr_3473 Flagellar P-ring protein low > 86
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_4007 Secretion protein HlyD 0.52 Psyr_3473 Flagellar P-ring protein low > 86
Erwinia tracheiphila SCR3 0.47 LU632_RS18180 efflux RND transporter periplasmic adaptor subunit 0.48 LU632_RS10430 flagellar basal body P-ring protein FlgI — —
Dickeya dadantii 3937 0.47 DDA3937_RS05740 efflux RND transporter periplasmic adaptor subunit 0.50 DDA3937_RS13445 flagellar basal body P-ring protein FlgI low > 74
Escherichia coli Nissle 1917 0.47 ECOLIN_RS18750 multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.48 ECOLIN_RS06250 flagellar basal body P-ring protein FlgI — —
Enterobacter sp. TBS_079 0.47 MPMX20_01065 Multidrug efflux pump subunit AcrA 0.48 MPMX20_01759 Flagellar P-ring protein low > 85
Rahnella sp. WP5 0.47 EX31_RS22475 efflux RND transporter periplasmic adaptor subunit 0.50 EX31_RS11280 flagellar basal body P-ring protein FlgI 0.30 71
Escherichia coli ECOR27 0.46 NOLOHH_09445 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.48 NOLOHH_21170 flgI flagellar basal body P-ring protein FlgI low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_00440 Multidrug export protein AcrE 0.48 OHPLBJKB_02585 Flagellar P-ring protein low > 73
Escherichia coli ECRC102 0.46 NIAGMN_15420 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.48 NIAGMN_24190 flgI flagellar basal body P-ring protein FlgI — —
Escherichia coli ECRC98 0.46 JDDGAC_21285 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.48 JDDGAC_07300 flgI flagellar basal body P-ring protein FlgI low > 86
Escherichia coli ECRC101 0.46 MCAODC_08180 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.48 MCAODC_23000 flgI flagellar basal body P-ring protein FlgI low > 87
Escherichia coli BW25113 0.46 b3265 acrE cytoplasmic membrane lipoprotein (NCBI) 0.48 b1080 flgI homolog of Salmonella P-ring of flagella basal body (VIMSS) low > 76
Escherichia coli ECRC99 0.46 KEDOAH_10490 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.48 KEDOAH_24115 flgI flagellar basal body P-ring protein FlgI — —
Escherichia coli ECRC62 0.46 BNILDI_02075 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.48 BNILDI_19330 flgI flagellar basal body P-ring protein FlgI low > 75
Escherichia coli ECRC100 0.46 OKFHMN_17660 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.48 OKFHMN_03640 flgI flagellar basal body P-ring protein FlgI — —
Escherichia coli BL21 0.46 ECD_03123 cytoplasmic membrane lipoprotein 0.48 ECD_01076 putative flagellar basal body protein low > 61
Pseudomonas fluorescens SBW25 0.46 PFLU_RS06810 efflux RND transporter periplasmic adaptor subunit 0.52 PFLU_RS21845 flagellar basal body P-ring protein FlgI 0.59 86
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS06810 efflux RND transporter periplasmic adaptor subunit 0.52 PFLU_RS21845 flagellar basal body P-ring protein FlgI low > 109
Enterobacter asburiae PDN3 0.46 EX28DRAFT_2495 RND family efflux transporter, MFP subunit 0.48 EX28DRAFT_1852 Flagellar basal-body P-ring protein low > 76
Dickeya dianthicola 67-19 0.46 HGI48_RS05795 efflux RND transporter periplasmic adaptor subunit 0.50 HGI48_RS13490 flagellar basal body P-ring protein FlgI low > 71
Pectobacterium carotovorum WPP14 0.46 HER17_RS15735 efflux RND transporter periplasmic adaptor subunit 0.51 HER17_RS08200 flagellar basal body P-ring protein FlgI low > 75
Dickeya dianthicola ME23 0.46 DZA65_RS06120 efflux RND transporter periplasmic adaptor subunit 0.50 DZA65_RS13975 flagellar basal body P-ring protein FlgI low > 75
Pseudomonas sp. RS175 0.45 PFR28_00632 putative efflux pump periplasmic linker TtgA 0.52 PFR28_00807 Flagellar P-ring protein low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF2117 RND efflux system, membrane fusion protein CmeA 0.48 GFF3361 Flagellar P-ring protein FlgI low > 78
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS34600 hemolysin D 0.53 BPHYT_RS18860 flagellar P-ring protein FlgI low > 109
Rhodopseudomonas palustris CGA009 0.43 TX73_012250 efflux RND transporter periplasmic adaptor subunit 0.38 TX73_020265 flagellar basal body P-ring protein FlgI low > 86
Sphingomonas koreensis DSMZ 15582 0.41 Ga0059261_0560 RND family efflux transporter, MFP subunit 0.44 Ga0059261_2096 Flagellar basal-body P-ring protein low > 68

Not shown: 2 genomes with orthologs for HSERO_RS06810 only; 45 genomes with orthologs for HSERO_RS10215 only