Conservation of cofitness between HSERO_RS22660 and HSERO_RS09280 in Herbaspirillum seropedicae SmR1

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS22660 tricarboxylate transporter 1.0 HSERO_RS09280 deoxyribodipyrimidine photo-lyase 0.35 2
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF1560 Tricarboxylate transport protein TctC 0.30 GFF4612 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) low > 78
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS03285 tricarboxylic transport membrane protein 0.66 RR42_RS15885 deoxyribodipyrimidine photolyase 0.41 52
Dickeya dadantii 3937 0.52 DDA3937_RS14490 tripartite tricarboxylate transporter substrate binding protein 0.27 DDA3937_RS06405 deoxyribodipyrimidine photo-lyase low > 74
Klebsiella michiganensis M5al 0.52 BWI76_RS20035 hypothetical protein 0.29 BWI76_RS08335 deoxyribodipyrimidine photo-lyase low > 92
Enterobacter sp. TBS_079 0.51 MPMX20_03193 hypothetical protein 0.30 MPMX20_01343 Deoxyribodipyrimidine photo-lyase low > 85
Dickeya dianthicola 67-19 0.51 HGI48_RS14460 tripartite tricarboxylate transporter substrate binding protein 0.28 HGI48_RS06450 deoxyribodipyrimidine photo-lyase low > 71
Dickeya dianthicola ME23 0.51 DZA65_RS15395 tripartite tricarboxylate transporter substrate binding protein 0.28 DZA65_RS06795 deoxyribodipyrimidine photo-lyase low > 75
Pantoea sp. MT58 0.51 IAI47_06210 tripartite tricarboxylate transporter substrate binding protein 0.27 IAI47_13815 deoxyribodipyrimidine photo-lyase low > 76
Serratia liquefaciens MT49 0.51 IAI46_17880 tripartite tricarboxylate transporter substrate binding protein 0.28 IAI46_06200 deoxyribodipyrimidine photo-lyase low > 86
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF3029 Tricarboxylate transport protein TctC 0.62 GFF647 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) low > 90
Pseudomonas sp. S08-1 0.48 OH686_19995 Tripartite tricarboxylate transporter TctC family 0.31 OH686_07850 Deoxyribodipyrimidine photolyase low > 80
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_4526 Tricarboxylate transport protein TctC 0.32 PfGW456L13_1589 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) low > 87
Pseudomonas putida KT2440 0.47 PP_1418 putative Tricarboxylate transport protein TctC 0.29 PP_0739 deoxyribodipyrimidine photolyase low > 96
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_17580 tricarboxylic transporter 0.32 AO353_14820 deoxyribodipyrimidine photolyase low > 101
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_3313 Tricarboxylate transport protein TctC 0.32 Pf1N1B4_2927 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) low > 87
Pseudomonas stutzeri RCH2 0.47 Psest_0206 Uncharacterized protein conserved in bacteria 0.31 Psest_2397 Deoxyribodipyrimidine photolyase low > 67
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_3966 Uncharacterized protein UPF0065 0.32 Psyr_0961 deoxyribodipyrimidine photo-lyase type I low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_3966 Uncharacterized protein UPF0065 0.32 Psyr_0961 deoxyribodipyrimidine photo-lyase type I low > 86
Pseudomonas simiae WCS417 0.47 PS417_07075 tricarboxylic transport membrane protein 0.31 PS417_03665 deoxyribodipyrimidine photolyase low > 88
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_04615 tricarboxylic transporter 0.31 AO356_16530 deoxyribodipyrimidine photolyase low > 104
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS07150 tripartite tricarboxylate transporter substrate binding protein 0.32 PFLU_RS03715 deoxyribodipyrimidine photo-lyase low > 109
Pseudomonas fluorescens SBW25 0.47 PFLU_RS07150 tripartite tricarboxylate transporter substrate binding protein 0.32 PFLU_RS03715 deoxyribodipyrimidine photo-lyase low > 109
Pseudomonas sp. RS175 0.46 PFR28_00681 hypothetical protein 0.31 PFR28_03648 Deoxyribodipyrimidine photo-lyase low > 88
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_2768 Tricarboxylate transport protein TctC 0.32 Pf6N2E2_5228 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) low > 103
Variovorax sp. SCN45 0.44 GFF2606 Tripartite tricarboxylate transporter TctC family 0.59 GFF2156 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) low > 127
Acidovorax sp. GW101-3H11 0.43 Ac3H11_112 Tricarboxylate transport protein TctC 0.58 Ac3H11_3983 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) low > 79
Variovorax sp. OAS795 0.41 ABID97_RS19745 tripartite tricarboxylate transporter substrate-binding protein 0.61 ABID97_RS24680 deoxyribodipyrimidine photo-lyase — —
Marinobacter adhaerens HP15 0.25 HP15_2661 Citrate uptake transporter, substrate-binding component TctC (from data) 0.33 HP15_715 deoxyribodipyrimidine photolyase low > 73
Rhizobium sp. OAE497 0.16 ABIE40_RS16420 tripartite tricarboxylate transporter substrate binding protein 0.29 ABIE40_RS08320 deoxyribodipyrimidine photo-lyase low > 107

Not shown: 1 genomes with orthologs for HSERO_RS22660 only; 55 genomes with orthologs for HSERO_RS09280 only