Conservation of cofitness between HSERO_RS16630 and HSERO_RS07765 in Herbaspirillum seropedicae SmR1

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS16630 sodium:proton antiporter 1.0 HSERO_RS07765 membrane protein 0.30 20
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS02000 sodium:proton antiporter 0.45 BPHYT_RS06990 membrane protein low > 109
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_02125 sodium/proton antiporter, CPA1 family 0.46 H281DRAFT_04955 TIGR00645 family protein
Paraburkholderia graminis OAS925 0.45 ABIE53_000546 Na+/H+ antiporter 0.45 ABIE53_001663 uncharacterized protein (TIGR00645 family) low > 113
Erwinia tracheiphila SCR3 0.44 LU632_RS23275 Na+/H+ antiporter 0.23 LU632_RS00860 TIGR00645 family protein low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF1446 Putative Na(+)/H(+) exchanger protein, CPA1 family precursor 0.23 GFF3112 Putative membrane protein low > 78
Pectobacterium carotovorum WPP14 0.44 HER17_RS17750 Na+/H+ antiporter 0.21 HER17_RS19160 TIGR00645 family protein low > 75
Pantoea sp. MT58 0.44 IAI47_17750 Na+/H+ antiporter 0.20 IAI47_01255 TIGR00645 family protein low > 76
Escherichia coli BW25113 0.43 b4065 yjcE predicted cation/proton antiporter (NCBI) 0.23 b3002 yqhA hypothetical protein (NCBI) low > 76
Escherichia coli ECRC98 0.43 JDDGAC_16490 yjcE Na+/H+ antiporter 0.23 JDDGAC_22620 yqhA UPF0114 protein YqhA low > 86
Escherichia coli ECRC101 0.43 MCAODC_03365 yjcE Na+/H+ antiporter 0.23 MCAODC_09500 yqhA UPF0114 protein YqhA low > 87
Escherichia coli ECRC102 0.43 NIAGMN_10700 yjcE Na+/H+ antiporter 0.23 NIAGMN_16750 yqhA UPF0114 protein YqhA
Escherichia coli ECRC62 0.43 BNILDI_06420 yjcE Na+/H+ antiporter 0.23 BNILDI_00755 yqhA UPF0114 protein YqhA low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_03976 Sodium, potassium, lithium and rubidium/H(+) antiporter 0.23 OHPLBJKB_00697 hypothetical protein low > 73
Escherichia coli ECOR27 0.43 NOLOHH_05105 yjcE Na+/H+ antiporter 0.23 NOLOHH_10760 yqhA UPF0114 protein YqhA low > 75
Escherichia coli ECRC99 0.43 KEDOAH_15295 yjcE Na+/H+ antiporter 0.23 KEDOAH_09160 yqhA UPF0114 protein YqhA
Escherichia coli BL21 0.43 ECD_03937 putative cation/proton antiporter 0.23 ECD_02877 UPF0114 family putative inner membrane protein low > 61
Escherichia coli ECRC100 0.43 OKFHMN_12855 yjcE Na+/H+ antiporter 0.23 OKFHMN_18985 yqhA UPF0114 protein YqhA low > 80
Serratia liquefaciens MT49 0.43 IAI46_22835 Na+/H+ antiporter 0.21 IAI46_12210 TIGR00645 family protein low > 86
Escherichia coli Nissle 1917 0.43 ECOLIN_RS23520 Na+/H+ antiporter 0.23 ECOLIN_RS17290 TIGR00645 family protein low > 55
Escherichia fergusonii Becca 0.43 EFB2_04526 Sodium, potassium, lithium and rubidium/H(+) antiporter 0.23 EFB2_00806 hypothetical protein low > 86
Escherichia coli ECOR38 0.43 HEPCGN_11470 nhaP Na+/H+ antiporter 0.23 HEPCGN_17845 yqhA UPF0114 protein YqhA low > 87
Enterobacter asburiae PDN3 0.43 EX28DRAFT_4238 Na+/H+ antiporter, bacterial form 0.22 EX28DRAFT_3040 TIGR00645 family protein low > 76
Enterobacter sp. TBS_079 0.43 MPMX20_00285 Sodium, potassium, lithium and rubidium/H(+) antiporter 0.23 MPMX20_03846 hypothetical protein low > 85
Klebsiella michiganensis M5al 0.43 BWI76_RS02020 Na+/H+ antiporter 0.23 BWI76_RS24270 membrane protein low > 92
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS00930 Na+/H+ antiporter 0.49 QEN71_RS23775 TIGR00645 family protein low > 153
Dickeya dadantii 3937 0.41 DDA3937_RS03465 Na+/H+ antiporter 0.21 DDA3937_RS04680 TIGR00645 family protein low > 74
Dickeya dianthicola ME23 0.40 DZA65_RS03680 Na+/H+ antiporter 0.23 DZA65_RS04555 TIGR00645 family protein low > 75
Dickeya dianthicola 67-19 0.40 HGI48_RS03565 Na+/H+ antiporter 0.23 HGI48_RS04635 TIGR00645 family protein low > 71
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_06060 sodium:proton antiporter 0.23 AO356_15775 hypothetical protein low > 104
Pseudomonas simiae WCS417 0.39 PS417_06190 sodium:proton antiporter 0.24 PS417_24215 hypothetical protein
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_3075 Na+/H+ antiporter 0.23 Pf6N2E2_5095 Putative inner membrane protein (Fragment) low > 103
Pseudomonas sp. RS175 0.38 PFR28_00392 Sodium, potassium, lithium and rubidium/H(+) antiporter 0.23 PFR28_03777 hypothetical protein low > 88
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_4714 Na+/H+ antiporter 0.23 PfGW456L13_1462 Putative inner membrane protein (Fragment) low > 87
Pseudomonas fluorescens SBW25 0.38 PFLU_RS06255 Na+/H+ antiporter 0.24 PFLU_RS26135 TIGR00645 family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS06255 Na+/H+ antiporter 0.24 PFLU_RS26135 TIGR00645 family protein low > 109
Pseudomonas putida KT2440 0.37 PP_1587 NhaP-type Na+/H+ and K+/H+ antiporters 0.24 PP_0682 conserved inner membrane protein of unknown function, UPF0114 family low > 96
Rhodospirillum rubrum S1H 0.33 Rru_A3545 Na+/H+ antiporter (NCBI) 0.22 Rru_A3669 Uncharacterized protein UPF0114 (NCBI) low > 58
Agrobacterium fabrum C58 0.17 Atu3059 Na+/H+ antiporter 0.24 Atu2286 hypothetical protein low > 89
Rhodopseudomonas palustris CGA009 0.15 TX73_002695 Na+/H+ antiporter 0.46 TX73_018680 TIGR00645 family protein low > 86
Dyella japonica UNC79MFTsu3.2 0.14 ABZR86_RS03665 sodium:proton antiporter 0.44 ABZR86_RS11550 TIGR00645 family protein low > 74
Azospirillum sp. SherDot2 0.13 MPMX19_03632 Sodium, potassium, lithium and rubidium/H(+) antiporter 0.28 MPMX19_03439 hypothetical protein low > 112
Rhizobium sp. OAE497 0.08 ABIE40_RS24280 cation:proton antiporter 0.24 ABIE40_RS13435 TIGR00645 family protein low > 107

Not shown: 11 genomes with orthologs for HSERO_RS16630 only; 26 genomes with orthologs for HSERO_RS07765 only