Conservation of cofitness between HSERO_RS02150 and HSERO_RS06135 in Herbaspirillum seropedicae SmR1

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS02150 MFS transporter 1.0 HSERO_RS06135 malonic semialdehyde reductase 0.31 10
Paraburkholderia bryophila 376MFSha3.1 0.58 H281DRAFT_04751 Predicted arabinose efflux permease, MFS family 0.63 H281DRAFT_04724 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase low > 103
Burkholderia phytofirmans PsJN 0.58 BPHYT_RS03860 MFS transporter 0.63 BPHYT_RS03720 malonic semialdehyde reductase low > 109
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS26090 MFS transporter 0.62 QEN71_RS26240 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG low > 153
Pseudomonas syringae pv. syringae B728a 0.51 Psyr_3578 Major facilitator superfamily 0.53 Psyr_0602 Short-chain dehydrogenase/reductase SDR low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.51 Psyr_3578 Major facilitator superfamily 0.53 Psyr_0602 Short-chain dehydrogenase/reductase SDR low > 86
Pseudomonas putida KT2440 0.50 PP_4492 carbohydrate efflux transporter 0.53 PP_4862 3-hydroxy acid dehydrogenase, NADP-dependent / malonic semialdehyde reductase low > 96
Pseudomonas fluorescens GW456-L13 0.49 PfGW456L13_4398 Xanthine transporter,putative 0.52 PfGW456L13_117 Oxidoreductase, short chain dehydrogenase/reductase family low > 87
Pseudomonas fluorescens FW300-N2E3 0.48 AO353_18565 MFS transporter 0.52 AO353_13380 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_3561 Xanthine transporter,putative 0.52 Pf1N1B4_1376 Oxidoreductase, short chain dehydrogenase/reductase family low > 87
Rahnella sp. WP5 0.47 EX31_RS13530 MFS transporter 0.64 EX31_RS07075 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG low > 89
Pseudomonas sp. RS175 0.47 PFR28_03309 putative MFS-type transporter YhhS 0.52 PFR28_05158 Sulfoacetaldehyde reductase low > 88
Pseudomonas fluorescens SBW25 0.47 PFLU_RS23850 MFS transporter 0.50 PFLU_RS02750 SDR family oxidoreductase low > 109
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS23850 MFS transporter 0.50 PFLU_RS02750 SDR family oxidoreductase low > 109
Pantoea sp. MT58 0.47 IAI47_13425 MFS transporter 0.61 IAI47_09805 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG low > 76
Pseudomonas simiae WCS417 0.46 PS417_13095 MFS transporter 0.49 PS417_02680 hypothetical protein low > 88
Pectobacterium carotovorum WPP14 0.46 HER17_RS00420 MFS transporter 0.64 HER17_RS10705 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG low > 75
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_5635 Xanthine transporter,putative 0.52 Pf6N2E2_3575 Oxidoreductase, short chain dehydrogenase/reductase family low > 103
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_18540 MFS transporter 0.52 AO356_08475 hypothetical protein 0.31 20
Erwinia tracheiphila SCR3 0.44 LU632_RS09225 MFS transporter 0.60 LU632_RS11720 ydfG bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG low > 74
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_00230 putative MFS-type transporter YhhS 0.64 OHPLBJKB_02173 NADP-dependent 3-hydroxy acid dehydrogenase YdfG low > 73
Escherichia coli BL21 0.43 ECD_03322 putative arabinose efflux transporter 0.64 ECD_01498 NADP-dependent 3-hydroxy acid dehydrogenase; malonic semialdehyde reductase low > 61
Escherichia fergusonii Becca 0.43 EFB2_00343 putative MFS-type transporter YhhS 0.64 EFB2_02417 NADP-dependent 3-hydroxy acid dehydrogenase YdfG low > 86
Escherichia coli Nissle 1917 0.43 ECOLIN_RS19855 MFS transporter 0.64 ECOLIN_RS08810 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG
Escherichia coli BW25113 0.43 b3473 yhhS putative transport (VIMSS) 0.64 b1539 ydfG L-allo-threonine dehydrogenase, NAD(P)-binding (NCBI) low > 76
Escherichia coli ECOR38 0.43 HEPCGN_15485 yhhS Uncharacterized MFS-type transporter YhhS 0.64 HEPCGN_26930 ydfG bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG low > 87
Escherichia coli ECOR27 0.43 NOLOHH_08460 yhhS Uncharacterized MFS-type transporter YhhS 0.64 NOLOHH_18640 ydfG bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG
Escherichia coli ECRC98 0.43 JDDGAC_20285 yhhS Uncharacterized MFS-type transporter YhhS 0.64 JDDGAC_03525 ydfG bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG low > 86
Escherichia coli ECRC99 0.43 KEDOAH_11485 yhhS Uncharacterized MFS-type transporter YhhS 0.64 KEDOAH_27415 ydfG bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG
Escherichia coli ECRC101 0.43 MCAODC_07185 yhhS Uncharacterized MFS-type transporter YhhS 0.64 MCAODC_16910 ydfG bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG low > 87
Escherichia coli ECRC100 0.43 OKFHMN_16655 yhhS Uncharacterized MFS-type transporter YhhS 0.64 OKFHMN_01015 ydfG bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG low > 80
Escherichia coli ECRC62 0.43 BNILDI_03055 yhhS Uncharacterized MFS-type transporter YhhS 0.64 BNILDI_17130 ydfG bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG low > 75
Enterobacter sp. TBS_079 0.43 MPMX20_04353 putative MFS-type transporter YhhS 0.63 MPMX20_02099 NADP-dependent 3-hydroxy acid dehydrogenase YdfG low > 85
Escherichia coli ECRC102 0.43 NIAGMN_14425 yhhS Uncharacterized MFS-type transporter YhhS 0.64 NIAGMN_25160 ydfG bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF531 Transporter, putative 0.65 GFF2497 3-hydroxypropionate dehydrogenase (EC 1.1.1.298) low > 78
Enterobacter asburiae PDN3 0.43 EX28DRAFT_4109 Arabinose efflux permease 0.63 EX28DRAFT_1450 Short-chain alcohol dehydrogenase of unknown specificity low > 76
Klebsiella michiganensis M5al 0.42 BWI76_RS26445 MFS transporter 0.64 BWI76_RS15475 NAD(P)-dependent oxidoreductase low > 92
Dickeya dianthicola 67-19 0.42 HGI48_RS20795 MFS transporter 0.63 HGI48_RS10690 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG low > 71
Dickeya dianthicola ME23 0.42 DZA65_RS21805 MFS transporter 0.63 DZA65_RS11160 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG low > 75
Dickeya dadantii 3937 0.40 DDA3937_RS00595 MFS transporter 0.64 DDA3937_RS10695 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG low > 74

Not shown: 2 genomes with orthologs for HSERO_RS02150 only; 33 genomes with orthologs for HSERO_RS06135 only