Conservation of cofitness between HSERO_RS17780 and HSERO_RS04940 in Herbaspirillum seropedicae SmR1

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS17780 50S rRNA methyltransferase 1.0 HSERO_RS04940 TonB-denpendent receptor 0.43 6
Paraburkholderia sabiae LMG 24235 0.78 QEN71_RS24420 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.18 QEN71_RS01815 TonB-dependent receptor low > 153
Ralstonia sp. UNC404CL21Col 0.77 ABZR87_RS15430 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.20 ABZR87_RS09310 TonB-dependent siderophore receptor low > 80
Paraburkholderia graminis OAS925 0.77 ABIE53_001541 23S rRNA (pseudouridine1915-N3)-methyltransferase 0.18 ABIE53_000730 iron complex outermembrane receptor protein — —
Paraburkholderia bryophila 376MFSha3.1 0.76 H281DRAFT_04517 23S rRNA (pseudouridine1915-N3)-methyltransferase 0.17 H281DRAFT_01915 iron complex outermembrane recepter protein low > 103
Burkholderia phytofirmans PsJN 0.75 BPHYT_RS06385 ribosomal RNA large subunit methyltransferase H 0.15 BPHYT_RS20295 ligand-gated channel low > 109
Ralstonia solanacearum IBSBF1503 0.74 RALBFv3_RS03565 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.21 RALBFv3_RS13225 TonB-dependent siderophore receptor low > 76
Ralstonia solanacearum UW163 0.74 UW163_RS10105 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.21 UW163_RS00345 TonB-dependent siderophore receptor — —
Ralstonia solanacearum GMI1000 0.73 RS_RS11015 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.21 RS_RS04020 TonB-dependent siderophore receptor — —
Ralstonia solanacearum PSI07 0.73 RPSI07_RS13660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.21 RPSI07_RS19995 TonB-dependent siderophore receptor low > 81
Acidovorax sp. GW101-3H11 0.56 Ac3H11_2418 LSU m3Psi1915 methyltransferase RlmH 0.15 Ac3H11_3948 Ferrichrome-iron receptor 0.23 74
Variovorax sp. OAS795 0.56 ABID97_RS16715 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.23 ABID97_RS15305 TonB-dependent siderophore receptor low > 91
Variovorax sp. SCN45 0.55 GFF298 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase (EC 2.1.1.177) 0.23 GFF1186 Ferrichrome-iron receptor low > 127
Pectobacterium carotovorum WPP14 0.49 HER17_RS15240 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.14 HER17_RS04145 TonB-dependent siderophore receptor low > 75
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_09750 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.45 OKGIIK_03670 TonB-dependent receptor low > 52
Rhodanobacter denitrificans FW104-10B01 0.43 LRK54_RS02695 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.45 LRK54_RS14900 TonB-dependent siderophore receptor low > 59
Rhodanobacter denitrificans MT42 0.43 LRK55_RS02450 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.45 LRK55_RS14615 TonB-dependent siderophore receptor low > 63
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS26660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.48 PFLU_RS12525 TonB-dependent siderophore receptor low > 109
Pseudomonas simiae WCS417 0.41 PS417_24730 50S rRNA methyltransferase 0.48 PS417_11750 TonB-dependent receptor — —
Pseudomonas fluorescens SBW25 0.41 PFLU_RS26660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.48 PFLU_RS12525 TonB-dependent siderophore receptor low > 109
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_2691 LSU m3Psi1915 methyltransferase RlmH 0.50 Pf1N1B4_5060 Ferrichrome-iron receptor — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_4366 Protein of unknown function DUF163 0.47 Psyr_3769 TonB-dependent siderophore receptor low > 86
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_4366 Protein of unknown function DUF163 0.47 Psyr_3769 TonB-dependent siderophore receptor — —
Pseudomonas putida KT2440 0.40 PP_4808 23S rRNA m3psi1915 methyltransferase 0.46 PP_1847 putative TonB-dependent ferric siderophore receptor low > 96
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.1876.1 LSU m3Psi1915 methyltransferase RlmH 0.42 Xcc-8004.4415.1 Ferrichrome-iron receptor — —

Not shown: 70 genomes with orthologs for HSERO_RS17780 only; 0 genomes with orthologs for HSERO_RS04940 only