Conservation of cofitness between HGI48_RS00230 and HGI48_RS15840 in Dickeya dianthicola 67-19

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS00230 urea carboxylase-associated family protein 1.0 HGI48_RS15840 sigma-E factor regulatory protein RseB 0.55 4
Dickeya dianthicola ME23 0.99 DZA65_RS00235 urea carboxylase-associated family protein 1.00 DZA65_RS16920 sigma-E factor regulatory protein RseB 0.33 37
Dickeya dadantii 3937 0.97 DDA3937_RS21010 urea carboxylase-associated family protein 0.93 DDA3937_RS15755 sigma-E factor regulatory protein RseB low > 74
Marinobacter adhaerens HP15 0.71 HP15_3147 urea carboxylase-associated protein 1 0.11 HP15_777 sigma E regulatory protein, MucB/RseB — —
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_3302 Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) 0.15 Pf1N1B4_3325 Sigma factor RpoE negative regulatory protein RseB precursor low > 87
Pseudomonas sp. RS175 0.66 PFR28_00670 hypothetical protein 0.16 PFR28_00692 Sigma factor AlgU regulatory protein MucB low > 88
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS15410 urea carboxylase-associated family protein 0.14 QEN71_RS04585 MucB/RseB C-terminal domain-containing protein low > 153
Burkholderia phytofirmans PsJN 0.65 BPHYT_RS25980 urea carboxylase 0.13 BPHYT_RS14395 sugar dehydratase low > 109
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_04665 urea carboxylase 0.16 AO356_04565 RNA polymerase subunit sigma low > 104
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_2779 Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) 0.15 Pf6N2E2_2754 Sigma factor RpoE negative regulatory protein RseB precursor low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.64 GFF5717 Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) 0.11 GFF3341 Sigma factor RpoE negative regulatory protein RseB precursor low > 90
Paraburkholderia graminis OAS925 0.64 ABIE53_006249 urea carboxylase-associated protein 1 0.13 ABIE53_003041 sigma-E factor negative regulatory protein RseB low > 113
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_03838 hypothetical protein 0.13 H281DRAFT_04357 sigma E regulatory protein, MucB/RseB low > 103
Klebsiella michiganensis M5al 0.63 BWI76_RS13980 hypothetical protein 0.57 BWI76_RS21345 sigma-E factor regulatory protein RseB low > 92
Enterobacter sp. TBS_079 0.62 MPMX20_02078 hypothetical protein 0.58 MPMX20_03442 Sigma-E factor regulatory protein RseB low > 85
Pseudomonas stutzeri RCH2 0.62 Psest_2349 urea carboxylase-associated protein 1 0.15 Psest_3098 Negative regulator of sigma E activity — —
Pantoea sp. MT58 0.62 IAI47_20185 urea carboxylase-associated family protein 0.55 IAI47_04860 sigma-E factor regulatory protein RseB low > 76
Pseudomonas sp. S08-1 0.62 OH686_05920 Urea carboxylase-related aminomethyltransferase 0.17 OH686_20055 Sigma factor RpoE negative regulatory protein RseB precursor — —
Pectobacterium carotovorum WPP14 0.62 HER17_RS09200 urea carboxylase-associated family protein 0.56 HER17_RS05790 sigma-E factor regulatory protein RseB low > 75
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_3976 conserved hypothetical protein 0.15 Psyr_3956 sigma E regulatory protein, MucB/RseB low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_3976 conserved hypothetical protein 0.15 Psyr_3956 sigma E regulatory protein, MucB/RseB low > 86
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS22350 urea carboxylase 0.13 HSERO_RS09635 transcriptional regulator low > 78
Rahnella sp. WP5 0.23 EX31_RS07435 urea carboxylase-associated family protein 0.55 EX31_RS21810 sigma-E factor regulatory protein RseB low > 89
Pseudomonas fluorescens GW456-L13 0.20 PfGW456L13_3119 Aminomethyltransferase (EC 2.1.2.10) 0.16 PfGW456L13_4514 Sigma factor RpoE negative regulatory protein RseB precursor low > 87

Not shown: 6 genomes with orthologs for HGI48_RS00230 only; 35 genomes with orthologs for HGI48_RS15840 only