Conservation of cofitness between HER17_RS10870 and HER17_RS19690 in Pectobacterium carotovorum WPP14

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS10870 HTH-type transcriptional regulator CysB 1.0 HER17_RS19690 cystathionine beta-lyase 0.95 4
Dickeya dadantii 3937 0.95 DDA3937_RS10540 HTH-type transcriptional regulator CysB 0.85 DDA3937_RS01815 cystathionine beta-lyase low > 74
Dickeya dianthicola ME23 0.95 DZA65_RS11020 HTH-type transcriptional regulator CysB 0.85 DZA65_RS01785 cystathionine beta-lyase 0.67 17
Dickeya dianthicola 67-19 0.95 HGI48_RS10540 HTH-type transcriptional regulator CysB 0.85 HGI48_RS01710 cystathionine beta-lyase 0.68 55
Serratia liquefaciens MT49 0.93 IAI46_13965 HTH-type transcriptional regulator CysB 0.82 IAI46_21725 cystathionine beta-lyase — —
Rahnella sp. WP5 0.93 EX31_RS09890 HTH-type transcriptional regulator CysB 0.81 EX31_RS08025 cystathionine beta-lyase low > 89
Klebsiella michiganensis M5al 0.92 BWI76_RS11930 LysR family transcriptional regulator CysB 0.77 BWI76_RS24285 cystathionine beta-lyase — —
Erwinia tracheiphila SCR3 0.92 LU632_RS12550 cysB HTH-type transcriptional regulator CysB 0.73 LU632_RS20545 metC cystathionine beta-lyase — —
Escherichia coli ECOR38 0.91 HEPCGN_25600 cysB HTH-type transcriptional regulator CysB 0.77 HEPCGN_17825 metC cystathionine beta-lyase 0.78 42
Enterobacter sp. TBS_079 0.91 MPMX20_02501 HTH-type transcriptional regulator CysB 0.78 MPMX20_03852 Cystathionine beta-lyase MetC — —
Escherichia coli ECRC62 0.91 BNILDI_18415 cysB HTH-type transcriptional regulator CysB 0.78 BNILDI_00780 metC cystathionine beta-lyase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.91 OHPLBJKB_02409 HTH-type transcriptional regulator CysB 0.78 OHPLBJKB_00693 Cystathionine beta-lyase MetC low > 73
Escherichia coli BW25113 0.91 b1275 cysB DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding (NCBI) 0.77 b3008 metC cystathionine beta-lyase (NCBI) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF2712 Cys regulon transcriptional activator CysB 0.77 GFF3120 Cystathionine beta-lyase (EC 4.4.1.8) — —
Escherichia fergusonii Becca 0.91 EFB2_02652 HTH-type transcriptional regulator CysB 0.77 EFB2_00802 Cystathionine beta-lyase MetC — —
Enterobacter asburiae PDN3 0.91 EX28DRAFT_0946 Transcriptional regulator 0.77 EX28DRAFT_3046 cystathionine beta-lyase, bacterial — —
Escherichia coli Nissle 1917 0.91 ECOLIN_RS07680 HTH-type transcriptional regulator CysB 0.78 ECOLIN_RS17315 cystathionine beta-lyase 0.54 12
Escherichia coli ECRC99 0.91 KEDOAH_26165 cysB HTH-type transcriptional regulator CysB 0.77 KEDOAH_09185 metC cystathionine beta-lyase — —
Escherichia coli BL21 0.91 ECD_01251 N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor 0.77 ECD_02881 cystathionine beta-lyase, PLP-dependent — —
Escherichia coli ECRC98 0.91 JDDGAC_05145 cysB HTH-type transcriptional regulator CysB 0.77 JDDGAC_22595 metC cystathionine beta-lyase — —
Escherichia coli ECRC102 0.91 NIAGMN_26770 cysB HTH-type transcriptional regulator CysB 0.77 NIAGMN_16725 metC cystathionine beta-lyase — —
Escherichia coli ECRC100 0.91 OKFHMN_02600 cysB HTH-type transcriptional regulator CysB 0.77 OKFHMN_18960 metC cystathionine beta-lyase — —
Escherichia coli ECOR27 0.91 NOLOHH_20265 cysB HTH-type transcriptional regulator CysB 0.78 NOLOHH_10735 metC cystathionine beta-lyase — —
Escherichia coli ECRC101 0.91 MCAODC_15665 cysB HTH-type transcriptional regulator CysB 0.77 MCAODC_09475 metC cystathionine beta-lyase — —
Pantoea sp. MT58 0.90 IAI47_09240 HTH-type transcriptional regulator CysB 0.73 IAI47_03215 cystathionine beta-lyase low > 76
Vibrio cholerae E7946 ATCC 55056 0.80 CSW01_09545 HTH-type transcriptional regulator CysB 0.65 CSW01_08400 cystathionine beta-lyase — —
Shewanella amazonensis SB2B 0.75 Sama_1324 cysB transcriptional regulator CysB (RefSeq) 0.53 Sama_2008 cystathionine beta-lyase (RefSeq) — —
Shewanella oneidensis MR-1 0.75 SO2649 cysB cys regulon transcriptional activator (NCBI ptt file) 0.54 SO2191 metC cystathionine beta-lyase (NCBI ptt file) 0.81 58
Shewanella loihica PV-4 0.75 Shew_1624 cysB transcriptional regulator CysB (RefSeq) 0.56 Shew_1789 cystathionine beta-lyase (RefSeq) — —
Shewanella sp. ANA-3 0.75 Shewana3_1731 cysB transcriptional regulator CysB (RefSeq) 0.54 Shewana3_2414 cystathionine beta-lyase (RefSeq) — —
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_19060 CysB family transcriptional regulator 0.38 AO353_24330 cystathionine beta-lyase low > 101
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein 0.34 Psyr_0607 cystathionine beta-lyase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein 0.34 Psyr_0607 cystathionine beta-lyase low > 86
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF5044 Alkanesulfonate utilization operon LysR-family regulator CbI 0.39 GFF5026 Cystathionine beta-lyase (EC 4.4.1.8) low > 90
Variovorax sp. SCN45 0.43 GFF244 Cys regulon transcriptional activator CysB 0.34 GFF1749 Cystathionine beta-lyase (EC 4.4.1.8) low > 127
Variovorax sp. OAS795 0.43 ABID97_RS16600 CysB family HTH-type transcriptional regulator 0.34 ABID97_RS22430 cystathionine beta-lyase low > 91
Castellaniella sp019104865 MT123 0.40 ABCV34_RS08230 CysB family HTH-type transcriptional regulator 0.30 ABCV34_RS12385 PLP-dependent aspartate aminotransferase family protein low > 48
Acidovorax sp. GW101-3H11 0.40 Ac3H11_2403 Alkanesulfonate utilization operon LysR-family regulator CbI 0.25 Ac3H11_4146 Cystathionine beta-lyase (EC 4.4.1.8) low > 79

Not shown: 22 genomes with orthologs for HER17_RS10870 only; 24 genomes with orthologs for HER17_RS19690 only