Conservation of cofitness between HER17_RS00785 and HER17_RS17925 in Pectobacterium carotovorum WPP14

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00785 agmatine deiminase 1.0 HER17_RS17925 FAD assembly factor SdhE 0.60 17
Dickeya dadantii 3937 0.82 DDA3937_RS00855 agmatine deiminase 0.87 DDA3937_RS03280 FAD assembly factor SdhE low > 74
Dickeya dianthicola 67-19 0.80 HGI48_RS20520 agmatine deiminase 0.87 HGI48_RS03420 FAD assembly factor SdhE — —
Dickeya dianthicola ME23 0.79 DZA65_RS21565 agmatine deiminase 0.86 DZA65_RS03465 FAD assembly factor SdhE low > 75
Shewanella amazonensis SB2B 0.69 Sama_2521 agmatine deiminase (RefSeq) 0.46 Sama_0871 hypothetical protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.68 Shewana3_3465 agmatine deiminase (RefSeq) 0.47 Shewana3_3035 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.68 SO_0887 agmatine deiminase (RefSeq) 0.46 SO1339 conserved hypothetical protein (NCBI ptt file) — —
Rahnella sp. WP5 0.67 EX31_RS21180 agmatine deiminase 0.84 EX31_RS13495 FAD assembly factor SdhE low > 89
Pseudomonas sp. S08-1 0.57 OH686_11505 agmatine deiminase 0.40 OH686_20030 Succinate dehydrogenase flavin-adding protein, antitoxin of CptAB toxin-antitoxin — —
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_11915 agmatine deiminase 0.40 AO353_17610 hypothetical protein — —
Pseudomonas putida KT2440 0.55 PP_0266 Agmatine deiminase 0.42 PP_1424 conserved protein of unknown function, DUF339 family — —
Pseudomonas sp. RS175 0.55 PFR28_04897 Agmatine deiminase 0.41 PFR28_00687 FAD assembly factor SdhE — —
Pseudomonas simiae WCS417 0.55 PS417_01340 agmatine deiminase 0.42 PS417_07105 hypothetical protein — —
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_3876 Agmatine deiminase (EC 3.5.3.12) 0.42 Pf6N2E2_2760 YgfY COG2938 — —
Pseudomonas fluorescens SBW25 0.55 PFLU_RS01435 agmatine deiminase 0.42 PFLU_RS07180 succinate dehydrogenase assembly factor 2 — —
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS01435 agmatine deiminase 0.42 PFLU_RS07180 succinate dehydrogenase assembly factor 2 — —
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_10030 Agmatine deiminase (EC 3.5.3.12) (from data) 0.42 AO356_04590 hypothetical protein — —
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_1661 Agmatine deiminase (EC 3.5.3.12) 0.42 Pf1N1B4_3320 YgfY COG2938 — —
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_397 Agmatine deiminase (EC 3.5.3.12) 0.42 PfGW456L13_4519 YgfY COG2938 — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_4932 agmatine deiminase 0.40 Psyr_3961 Protein of unknown function DUF339 — —
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_4932 agmatine deiminase 0.40 Psyr_3961 Protein of unknown function DUF339 — —
Pseudomonas stutzeri RCH2 0.53 Psest_4291 agmatine deiminase 0.41 Psest_3103 Uncharacterized conserved protein — —
Kangiella aquimarina DSM 16071 0.30 B158DRAFT_1812 Peptidylarginine deiminase and related enzymes 0.32 B158DRAFT_2177 Uncharacterized conserved protein — —
Rhodanobacter sp. FW510-T8 0.23 OKGIIK_06975 Agmatine deiminase 0.30 OKGIIK_08470 sdhE Succinate dehydrogenase flavin-adding protein, antitoxin component of the CptAB toxin-antitoxin module — —
Rhodanobacter denitrificans MT42 0.22 LRK55_RS00025 agmatine deiminase family protein 0.29 LRK55_RS15935 succinate dehydrogenase assembly factor 2 — —
Rhodanobacter denitrificans FW104-10B01 0.22 LRK54_RS00335 agmatine deiminase family protein 0.29 LRK54_RS16185 succinate dehydrogenase assembly factor 2 — —
Marinobacter adhaerens HP15 0.21 HP15_2073 peptidyl-arginine deiminase family protein 0.33 HP15_773 conserved hypothetical protein — —
Alteromonas macleodii MIT1002 0.19 MIT1002_03760 Putative agmatine deiminase 0.49 MIT1002_02723 Antitoxin CptB — —
Serratia liquefaciens MT49 0.19 IAI46_12735 agmatine deiminase family protein 0.86 IAI46_20760 FAD assembly factor SdhE low > 86

Not shown: 21 genomes with orthologs for HER17_RS00785 only; 21 genomes with orthologs for HER17_RS17925 only