Conservation of cofitness between HER17_RS18005 and HER17_RS16250 in Pectobacterium carotovorum WPP14

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS18005 glycine cleavage system aminomethyltransferase GcvT 1.0 HER17_RS16250 VOC family protein 0.59 9
Dickeya dadantii 3937 0.82 DDA3937_RS03245 glycine cleavage system aminomethyltransferase GcvT 0.81 DDA3937_RS05200 VOC family protein low > 74
Dickeya dianthicola 67-19 0.82 HGI48_RS03390 glycine cleavage system aminomethyltransferase GcvT 0.79 HGI48_RS05200 VOC family protein low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS03435 glycine cleavage system aminomethyltransferase GcvT 0.79 DZA65_RS05540 VOC family protein low > 75
Serratia liquefaciens MT49 0.81 IAI46_20860 glycine cleavage system aminomethyltransferase GcvT 0.77 IAI46_20160 VOC family protein low > 86
Rahnella sp. WP5 0.81 EX31_RS21510 glycine cleavage system aminomethyltransferase GcvT 0.75 EX31_RS12945 VOC family protein low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.78 GFF3005 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.75 GFF34 FIG01280259: hypothetical protein low > 78
Enterobacter sp. TBS_079 0.78 MPMX20_03764 Aminomethyltransferase 0.75 MPMX20_00871 hypothetical protein low > 85
Escherichia coli Nissle 1917 0.78 ECOLIN_RS16175 glycine cleavage system aminomethyltransferase GcvT 0.76 ECOLIN_RS01015 VOC family protein low > 55
Klebsiella michiganensis M5al 0.78 BWI76_RS23880 Aminomethyltransferase (EC 2.1.2.10) (from data) 0.74 BWI76_RS05305 VOC family protein — —
Escherichia coli ECRC62 0.78 BNILDI_09970 gcvT glycine cleavage system aminomethyltransferase GcvT 0.76 BNILDI_09205 yaeR VOC family protein low > 75
Escherichia coli ECOR27 0.78 NOLOHH_11435 gcvT glycine cleavage system aminomethyltransferase GcvT 0.76 NOLOHH_02465 yaeR VOC family protein low > 75
Escherichia coli BW25113 0.78 b2905 gcvT glycine cleavage system aminomethyltransferase T (NCBI) 0.76 b0187 yaeR orf, hypothetical protein (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_00810 Aminomethyltransferase 0.76 OHPLBJKB_03476 hypothetical protein low > 73
Escherichia coli BL21 0.78 ECD_02737 aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex 0.75 ECD_00185 putative lyase low > 61
Escherichia coli ECOR38 0.77 HEPCGN_18810 gcvT glycine cleavage system aminomethyltransferase GcvT 0.76 HEPCGN_08075 yaeR VOC family protein low > 87
Escherichia fergusonii Becca 0.77 EFB2_00997 Aminomethyltransferase 0.76 EFB2_03857 hypothetical protein low > 86
Enterobacter asburiae PDN3 0.77 EX28DRAFT_2957 glycine cleavage system T protein 0.74 EX28DRAFT_3775 Lactoylglutathione lyase and related lyases low > 76
Escherichia coli ECRC98 0.77 JDDGAC_23160 gcvT glycine cleavage system aminomethyltransferase GcvT 0.76 JDDGAC_13715 yaeR VOC family protein low > 86
Escherichia coli ECRC100 0.77 OKFHMN_19520 gcvT glycine cleavage system aminomethyltransferase GcvT 0.76 OKFHMN_10120 yaeR VOC family protein low > 80
Escherichia coli ECRC102 0.77 NIAGMN_17285 gcvT glycine cleavage system aminomethyltransferase GcvT 0.76 NIAGMN_07970 yaeR VOC family protein — —
Escherichia coli ECRC99 0.77 KEDOAH_08620 gcvT glycine cleavage system aminomethyltransferase GcvT 0.76 KEDOAH_18035 yaeR VOC family protein — —
Escherichia coli ECRC101 0.77 MCAODC_10040 gcvT glycine cleavage system aminomethyltransferase GcvT 0.76 MCAODC_00635 yaeR VOC family protein low > 87
Erwinia tracheiphila SCR3 0.77 LU632_RS05905 gcvT glycine cleavage system aminomethyltransferase GcvT 0.69 LU632_RS19875 VOC family protein low > 74
Pantoea sp. MT58 0.77 IAI47_03765 glycine cleavage system aminomethyltransferase GcvT 0.75 IAI47_15440 VOC family protein low > 76
Shewanella oneidensis MR-1 0.64 SO0779 gcvT glycine cleavage system T protein (NCBI ptt file) 0.57 SO2155 glyoxalase family protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.63 Shewana3_3501 gcvT glycine cleavage system aminomethyltransferase T (RefSeq) 0.52 Shewana3_2315 glyoxalase/bleomycin resistance protein/dioxygenase (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.62 MIT1002_02973 Aminomethyltransferase 0.58 MIT1002_03753 putative lyase low > 70
Pseudomonas stutzeri RCH2 0.57 Psest_0181 glycine cleavage system T protein 0.54 Psest_0758 Lactoylglutathione lyase and related lyases low > 67
Xanthomonas campestris pv. campestris strain 8004 0.52 Xcc-8004.1567.1 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.56 Xcc-8004.3591.1 FIG01280259: hypothetical protein low > 74
Rhodanobacter sp. FW510-T8 0.51 OKGIIK_01305 gcvT glycine cleavage system aminomethyltransferase GcvT 0.48 OKGIIK_07490 VOC family protein low > 52
Lysobacter sp. OAE881 0.50 ABIE51_RS16365 glycine cleavage system aminomethyltransferase GcvT 0.49 ABIE51_RS00375 VOC family protein low > 62
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_02411 aminomethyltransferase 0.54 H281DRAFT_02954 glyoxylase I family protein low > 103
Echinicola vietnamensis KMM 6221, DSM 17526 0.31 Echvi_0091 glycine cleavage system T protein 0.62 Echvi_2363 Predicted ring-cleavage extradiol dioxygenase low > 79
Mucilaginibacter yixingensis YX-36 DSM 26809 0.29 ABZR88_RS21210 glycine cleavage system aminomethyltransferase GcvT 0.66 ABZR88_RS09770 VOC family protein — —
Pedobacter sp. GW460-11-11-14-LB5 0.28 CA265_RS23960 glycine cleavage system protein T 0.62 CA265_RS05200 hypothetical protein low > 88
Vibrio cholerae E7946 ATCC 55056 0.22 CSW01_15350 glycine cleavage system aminomethyltransferase T 0.53 CSW01_18595 VOC family protein low > 62
Azospirillum sp. SherDot2 0.22 MPMX19_01029 Aminomethyltransferase 0.19 MPMX19_04138 hypothetical protein low > 112
Rhizobium sp. OAE497 0.22 ABIE40_RS09940 glycine cleavage system aminomethyltransferase GcvT 0.23 ABIE40_RS21760 VOC family protein low > 107
Acidovorax sp. GW101-3H11 0.20 Ac3H11_165 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.50 Ac3H11_2068 FIG01280259: hypothetical protein — —

Not shown: 55 genomes with orthologs for HER17_RS18005 only; 1 genomes with orthologs for HER17_RS16250 only