Conservation of cofitness between HER17_RS00785 and HER17_RS15880 in Pectobacterium carotovorum WPP14

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00785 agmatine deiminase 1.0 HER17_RS15880 cytochrome o ubiquinol oxidase subunit I 0.73 1
Dickeya dadantii 3937 0.82 DDA3937_RS00855 agmatine deiminase 0.95 DDA3937_RS05610 cytochrome o ubiquinol oxidase subunit I low > 74
Dickeya dianthicola 67-19 0.80 HGI48_RS20520 agmatine deiminase 0.95 HGI48_RS05655 cytochrome o ubiquinol oxidase subunit I low > 71
Dickeya dianthicola ME23 0.79 DZA65_RS21565 agmatine deiminase 0.94 DZA65_RS05980 cytochrome o ubiquinol oxidase subunit I low > 75
Shewanella sp. ANA-3 0.68 Shewana3_3465 agmatine deiminase (RefSeq) 0.67 Shewana3_4032 cytochrome c oxidase, subunit I (RefSeq) low > 73
Rahnella sp. WP5 0.67 EX31_RS21180 agmatine deiminase 0.86 EX31_RS22215 cytochrome o ubiquinol oxidase subunit I low > 89
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_11915 agmatine deiminase 0.69 AO353_15455 cytochrome o ubiquinol oxidase subunit I low > 101
Pseudomonas sp. RS175 0.55 PFR28_04897 Agmatine deiminase 0.69 PFR28_00243 Cytochrome bo(3) ubiquinol oxidase subunit 1 low > 88
Pseudomonas putida KT2440 0.55 PP_0266 Agmatine deiminase 0.70 PP_0813 cytochrome bo terminal oxidase subunit I — —
Pseudomonas simiae WCS417 0.55 PS417_01340 agmatine deiminase 0.72 PS417_23385 cytochrome o ubiquinol oxidase subunit I low > 88
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_3876 Agmatine deiminase (EC 3.5.3.12) 0.69 Pf6N2E2_5318 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) low > 103
Pseudomonas fluorescens SBW25 0.55 PFLU_RS01435 agmatine deiminase 0.72 PFLU_RS25215 cytochrome o ubiquinol oxidase subunit I low > 109
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS01435 agmatine deiminase 0.72 PFLU_RS25215 cytochrome o ubiquinol oxidase subunit I low > 109
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_10030 Agmatine deiminase (EC 3.5.3.12) (from data) 0.70 AO356_16965 cytochrome o ubiquinol oxidase subunit I low > 104
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_1661 Agmatine deiminase (EC 3.5.3.12) 0.70 Pf1N1B4_972 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) low > 87
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_397 Agmatine deiminase (EC 3.5.3.12) 0.68 PfGW456L13_4935 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_4932 agmatine deiminase 0.70 Psyr_1142 cytochrome bo3 quinol oxidase subunit 1 apoprotein — —
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_4932 agmatine deiminase 0.70 Psyr_1142 cytochrome bo3 quinol oxidase subunit 1 apoprotein — —
Azospirillum brasilense Sp245 0.37 AZOBR_RS08825 agmatine deiminase 0.68 AZOBR_RS23175 cytochrome O ubiquinol oxidase low > 97
Azospirillum sp. SherDot2 0.36 MPMX19_04878 Agmatine deiminase 0.68 MPMX19_06176 Cytochrome bo(3) ubiquinol oxidase subunit 1 — —
Brevundimonas sp. GW460-12-10-14-LB2 0.27 A4249_RS11140 agmatine deiminase family protein 0.67 A4249_RS04450 cytochrome o ubiquinol oxidase subunit I — —
Caulobacter crescentus NA1000 0.26 CCNA_00211 Porphyromonas-type peptidyl-arginine deiminase 0.68 CCNA_01850 quinol cytochrome oxidase polypeptide I — —
Caulobacter crescentus NA1000 Δfur 0.26 CCNA_00211 Porphyromonas-type peptidyl-arginine deiminase 0.68 CCNA_01850 quinol cytochrome oxidase polypeptide I — —
Variovorax sp. SCN45 0.24 GFF37 Similar to Agmatine deiminase 0.67 GFF5677 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) low > 127
Lysobacter sp. OAE881 0.23 ABIE51_RS09325 agmatine deiminase family protein 0.65 ABIE51_RS09770 cytochrome o ubiquinol oxidase subunit I — —
Dyella japonica UNC79MFTsu3.2 0.23 ABZR86_RS02780 agmatine/peptidylarginine deiminase 0.65 ABZR86_RS07620 cytochrome o ubiquinol oxidase subunit I — —
Sphingomonas koreensis DSMZ 15582 0.20 Ga0059261_1981 Peptidylarginine deiminase and related enzymes 0.64 Ga0059261_1565 cytochrome bo3 quinol oxidase subunit 1 apoprotein (EC 1.10.3.-) — —
Xanthomonas campestris pv. campestris strain 8004 0.20 Xcc-8004.2375.1 Agmatine deiminase (EC 3.5.3.12) 0.71 Xcc-8004.3816.1 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) — —
Alteromonas macleodii MIT1002 0.19 MIT1002_03760 Putative agmatine deiminase 0.65 MIT1002_03928 Ubiquinol oxidase subunit 1 low > 70
Serratia liquefaciens MT49 0.19 IAI46_12735 agmatine deiminase family protein 0.88 IAI46_04980 cytochrome o ubiquinol oxidase subunit I low > 86

Not shown: 20 genomes with orthologs for HER17_RS00785 only; 38 genomes with orthologs for HER17_RS15880 only