Conservation of cofitness between HER17_RS14220 and HER17_RS12400 in Pectobacterium carotovorum WPP14

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS14220 dicarboxylate/amino acid:cation symporter 1.0 HER17_RS12400 ATP-dependent Clp protease ATP-binding subunit ClpA 0.73 2
Dickeya dadantii 3937 0.83 DDA3937_RS07395 dicarboxylate/amino acid:cation symporter 0.94 DDA3937_RS09560 ATP-dependent Clp protease ATP-binding subunit ClpA low > 74
Dickeya dianthicola 67-19 0.81 HGI48_RS07260 dicarboxylate/amino acid:cation symporter 0.94 HGI48_RS09575 ATP-dependent Clp protease ATP-binding subunit ClpA low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS07770 dicarboxylate/amino acid:cation symporter 0.94 DZA65_RS09885 ATP-dependent Clp protease ATP-binding subunit ClpA low > 75
Ralstonia solanacearum PSI07 0.64 RPSI07_RS14855 dicarboxylate/amino acid:cation symporter 0.61 RPSI07_RS12575 ATP-dependent Clp protease ATP-binding subunit ClpA low > 81
Ralstonia solanacearum GMI1000 0.64 RS_RS09840 dicarboxylate/amino acid:cation symporter 0.62 RS_RS12370 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Ralstonia solanacearum UW163 0.63 UW163_RS11255 dicarboxylate/amino acid:cation symporter 0.61 UW163_RS08860 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Ralstonia solanacearum IBSBF1503 0.63 RALBFv3_RS02470 dicarboxylate/amino acid:cation symporter 0.61 RALBFv3_RS04810 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_2249 Proton/glutamate symport protein @ Sodium/glutamate symport protein 0.65 Pf6N2E2_292 ATP-dependent Clp protease ATP-binding subunit ClpA low > 103
Pseudomonas simiae WCS417 0.61 PS417_19045 amino acid:proton symporter 0.66 PS417_16510 Clp protease ClpX low > 88
Pseudomonas fluorescens FW300-N2C3 0.61 AO356_01905 L-aspartate transporter (from data) 0.65 AO356_22150 ATP-dependent Clp protease ATP-binding subunit ClpA low > 104
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS14385 dicarboxylate/amino acid:cation symporter 0.62 ABZR87_RS00435 ATP-dependent Clp protease ATP-binding subunit ClpA low > 80
Cupriavidus basilensis FW507-4G11 0.60 RR42_RS26130 C4-dicarboxylate ABC transporter 0.61 RR42_RS17105 Clp protease ClpX low > 128
Azospirillum sp. SherDot2 0.55 MPMX19_03595 C4-dicarboxylate transport protein 2 0.58 MPMX19_00503 ATP-dependent Clp protease ATP-binding subunit ClpA low > 112
Dechlorosoma suillum PS 0.54 Dsui_3482 Na+/H+ dicarboxylate symporter 0.62 Dsui_0009 ATP-dependent Clp protease ATP-binding subunit clpA low > 51
Variovorax sp. SCN45 0.53 GFF5354 C4-dicarboxylate transport protein 0.61 GFF341 ATP-dependent Clp protease ATP-binding subunit ClpA low > 127
Caulobacter crescentus NA1000 Δfur 0.51 CCNA_00264 C4-dicarboxylate transport protein 0.59 CCNA_02553 ATP-dependent clp protease ATP-binding subunit ClpA low > 67
Caulobacter crescentus NA1000 0.51 CCNA_00264 C4-dicarboxylate transport protein 0.59 CCNA_02553 ATP-dependent clp protease ATP-binding subunit ClpA low > 66
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_5607 C4-dicarboxylate transport protein 0.65 Pf1N1B4_4055 ATP-dependent Clp protease ATP-binding subunit ClpA low > 87
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS33330 C4-dicarboxylate ABC transporter 0.61 BPHYT_RS15710 ATP-dependent Clp protease ATP-binding protein low > 109
Sphingomonas koreensis DSMZ 15582 0.50 Ga0059261_0201 Na+/H+-dicarboxylate symporters 0.58 Ga0059261_1001 ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) low > 68
Variovorax sp. OAS795 0.50 ABID97_RS23115 dicarboxylate/amino acid:cation symporter 0.61 ABID97_RS16910 ATP-dependent Clp protease ATP-binding subunit ClpA low > 91
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS19090 C4-dicarboxylate ABC transporter 0.63 HSERO_RS07030 ATP-dependent Clp protease ATP-binding protein — —
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS33810 dicarboxylate/amino acid:cation symporter 0.62 QEN71_RS03005 ATP-dependent Clp protease ATP-binding subunit ClpA low > 153
Enterobacter sp. TBS_079 0.48 MPMX20_02796 C4-dicarboxylate transport protein 0.91 MPMX20_01544 ATP-dependent Clp protease ATP-binding subunit ClpA low > 85
Klebsiella michiganensis M5al 0.47 BWI76_RS19175 dicarboxylate/amino acid:cation symporter 0.91 BWI76_RS09615 ATP-dependent Clp protease ATP-binding subunit ClpA low > 92
Enterobacter asburiae PDN3 0.46 EX28DRAFT_0664 Na+/H+-dicarboxylate symporters 0.91 EX28DRAFT_2050 ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) low > 76
Escherichia coli ECOR38 0.42 HEPCGN_01380 gltP dicarboxylate/amino acid:cation symporter 0.92 HEPCGN_22900 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 87
Escherichia coli ECRC99 0.42 KEDOAH_21075 gltP dicarboxylate/amino acid:cation symporter 0.92 KEDOAH_22125 clpA ATP-dependent Clp protease ATP-binding subunit ClpA — —
Escherichia coli ECRC102 0.42 NIAGMN_04940 gltP dicarboxylate/amino acid:cation symporter 0.92 NIAGMN_03825 clpA ATP-dependent Clp protease ATP-binding subunit ClpA — —
Escherichia coli ECRC98 0.42 JDDGAC_10545 gltP dicarboxylate/amino acid:cation symporter 0.92 JDDGAC_09420 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Escherichia coli ECRC100 0.42 OKFHMN_06890 gltP dicarboxylate/amino acid:cation symporter 0.92 OKFHMN_05785 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 80
Escherichia coli ECRC101 0.42 MCAODC_26110 gltP dicarboxylate/amino acid:cation symporter 0.92 MCAODC_25000 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 87

Not shown: 2 genomes with orthologs for HER17_RS14220 only; 56 genomes with orthologs for HER17_RS12400 only