Conservation of cofitness between HER17_RS00965 and HER17_RS11800 in Pectobacterium carotovorum WPP14

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00965 HTH-type transcriptional repressor FabR 1.0 HER17_RS11800 murein DD-endopeptidase MepM 0.86 19
Dickeya dianthicola ME23 0.93 DZA65_RS21440 HTH-type transcriptional repressor FabR 0.77 DZA65_RS10550 murein DD-endopeptidase MepM low > 75
Dickeya dianthicola 67-19 0.93 HGI48_RS20395 HTH-type transcriptional repressor FabR 0.77 HGI48_RS10135 murein DD-endopeptidase MepM low > 71
Dickeya dadantii 3937 0.93 DDA3937_RS00980 HTH-type transcriptional repressor FabR 0.76 DDA3937_RS10105 murein DD-endopeptidase MepM
Escherichia coli ECRC102 0.92 NIAGMN_11295 fabR HTH-type transcriptional repressor FabR 0.77 NIAGMN_01750 mepM murein DD-endopeptidase MepM
Enterobacter sp. TBS_079 0.92 MPMX20_04517 HTH-type transcriptional repressor FabR 0.78 MPMX20_02761 Murein DD-endopeptidase MepM low > 85
Escherichia coli ECRC98 0.92 JDDGAC_17170 fabR HTH-type transcriptional repressor FabR 0.77 JDDGAC_00885 mepM murein DD-endopeptidase MepM low > 86
Enterobacter asburiae PDN3 0.92 EX28DRAFT_4426 transcriptional regulator, TetR family 0.77 EX28DRAFT_0700 Membrane proteins related to metalloendopeptidases low > 76
Escherichia coli BL21 0.92 ECD_03848 transcriptional repressor of fabA and fabB 0.77 ECD_01827 murein DD-endopeptidase, space-maker hydrolase, septation protein low > 61
Escherichia coli ECRC62 0.92 BNILDI_05835 fabR HTH-type transcriptional repressor FabR 0.77 BNILDI_15540 mepM murein DD-endopeptidase MepM low > 75
Escherichia coli Nissle 1917 0.92 ECOLIN_RS22890 HTH-type transcriptional repressor FabR 0.77 ECOLIN_RS10340 murein DD-endopeptidase MepM
Escherichia coli BW25113 0.92 b3963 fabR DNA-binding transcriptional repressor (RefSeq) 0.77 b1856 yebA orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC99 0.92 KEDOAH_14615 fabR HTH-type transcriptional repressor FabR 0.77 KEDOAH_01795 mepM murein DD-endopeptidase MepM
Escherichia fergusonii Becca 0.92 EFB2_04647 HTH-type transcriptional repressor FabR 0.77 EFB2_02086 Murein DD-endopeptidase MepM low > 86
Escherichia coli ECRC101 0.92 MCAODC_04045 fabR HTH-type transcriptional repressor FabR 0.77 MCAODC_19095 mepM murein DD-endopeptidase MepM low > 87
Escherichia coli ECOR38 0.92 HEPCGN_12200 fabR HTH-type transcriptional repressor FabR 0.77 HEPCGN_04715 mepM murein DD-endopeptidase MepM low > 87
Escherichia coli ECRC100 0.92 OKFHMN_13545 fabR HTH-type transcriptional repressor FabR 0.77 OKFHMN_26310 mepM murein DD-endopeptidase MepM low > 80
Escherichia coli ECOR27 0.92 NOLOHH_05690 fabR HTH-type transcriptional repressor FabR 0.77 NOLOHH_16750 mepM murein DD-endopeptidase MepM low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.92 OHPLBJKB_04087 HTH-type transcriptional repressor FabR 0.77 OHPLBJKB_01872 Murein DD-endopeptidase MepM low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF2349 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.77 GFF1635 Cell wall endopeptidase, family M23/M37 low > 78
Klebsiella michiganensis M5al 0.91 BWI76_RS00875 DNA-binding transcriptional regulator FabR 0.76 BWI76_RS18125 murein DD-endopeptidase MepM low > 92
Serratia liquefaciens MT49 0.91 IAI46_24465 HTH-type transcriptional repressor FabR 0.82 IAI46_14600 murein DD-endopeptidase MepM 0.80 12
Rahnella sp. WP5 0.90 EX31_RS14160 HTH-type transcriptional repressor FabR 0.73 EX31_RS10670 murein DD-endopeptidase MepM low > 89
Erwinia tracheiphila SCR3 0.90 LU632_RS19580 fabR HTH-type transcriptional repressor FabR 0.71 LU632_RS13390 mepM murein DD-endopeptidase MepM low > 74
Pantoea sp. MT58 0.90 IAI47_00940 HTH-type transcriptional repressor FabR 0.74 IAI47_08470 murein DD-endopeptidase MepM low > 76
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_00775 HTH-type transcriptional repressor FabR 0.30 CSW01_02665 peptidase M23 low > 62
Shewanella amazonensis SB2B 0.65 Sama_0192 DNA-binding transcriptional repressor FabR (RefSeq) 0.28 Sama_1269 M24/M37 family peptidase (RefSeq)
Shewanella oneidensis MR-1 0.65 SO0198 transcriptional regulator, TetR family (NCBI ptt file) 0.29 SO2842 peptidase, M23/M37 family (NCBI ptt file)
Shewanella sp. ANA-3 0.65 Shewana3_0178 DNA-binding transcriptional repressor FabR (RefSeq) 0.29 Shewana3_2610 peptidase M23B (RefSeq)
Shewanella loihica PV-4 0.65 Shew_0137 DNA-binding transcriptional repressor FabR (RefSeq) 0.26 Shew_2455 peptidase M23B (RefSeq) low > 60
Marinobacter adhaerens HP15 0.56 HP15_2045 DNA-binding transcriptional repressor FabR 0.20 HP15_357 peptidase M23B
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_4450 transcriptional regulator, TetR family 0.22 Psyr_4566 Peptidase M23B low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_4450 transcriptional regulator, TetR family 0.22 Psyr_4566 Peptidase M23B
Pseudomonas putida KT2440 0.27 PP_4859 Transcriptional regulator, TetR family 0.23 PP_0435 Peptidase, M23/M37 family low > 96
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_13415 TetR family transcriptional regulator 0.22 AO353_07140 peptidase M23 low > 101
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_3568 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.22 Pf6N2E2_4839 Cell wall endopeptidase, family M23/M37

Not shown: 15 genomes with orthologs for HER17_RS00965 only; 8 genomes with orthologs for HER17_RS11800 only