Conservation of cofitness between HER17_RS15875 and HER17_RS11630 in Pectobacterium carotovorum WPP14

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS15875 cytochrome o ubiquinol oxidase subunit II 1.0 HER17_RS11630 high frequency lysogenization protein HflD 0.79 4
Dickeya dadantii 3937 0.82 DDA3937_RS05615 cytochrome o ubiquinol oxidase subunit II 0.75 DDA3937_RS11490 high frequency lysogenization protein HflD low > 74
Dickeya dianthicola 67-19 0.82 HGI48_RS05660 cytochrome o ubiquinol oxidase subunit II 0.76 HGI48_RS11535 high frequency lysogenization protein HflD low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS05985 cytochrome o ubiquinol oxidase subunit II 0.76 DZA65_RS11870 high frequency lysogenization protein HflD low > 75
Escherichia coli ECRC62 0.68 BNILDI_22710 cyoA cytochrome o ubiquinol oxidase subunit II 0.70 BNILDI_19070 hflD high frequency lysogenization protein HflD low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_03241 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.71 OHPLBJKB_02536 High frequency lysogenization protein HflD low > 73
Escherichia coli ECOR27 0.68 NOLOHH_01295 cyoA cytochrome o ubiquinol oxidase subunit II 0.70 NOLOHH_20905 hflD high frequency lysogenization protein HflD 0.60 65
Escherichia coli BL21 0.68 ECD_00383 cytochrome o ubiquinol oxidase subunit II 0.71 ECD_01130 putative lysogenization regulator low > 61
Escherichia coli ECOR38 0.68 HEPCGN_06975 cyoA cytochrome o ubiquinol oxidase subunit II 0.71 HEPCGN_24215 hflD high frequency lysogenization protein HflD low > 87
Escherichia coli Nissle 1917 0.68 ECOLIN_RS02595 cytochrome o ubiquinol oxidase subunit II 0.71 ECOLIN_RS06620 high frequency lysogenization protein HflD — —
Escherichia coli BW25113 0.68 b0432 cyoA cytochrome o ubiquinol oxidase subunit II (NCBI) 0.71 b1132 hflD hypothetical protein (NCBI) low > 76
Escherichia fergusonii Becca 0.67 EFB2_03625 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.71 EFB2_02843 High frequency lysogenization protein HflD low > 86
Escherichia coli ECRC101 0.67 MCAODC_27585 cyoA cytochrome o ubiquinol oxidase subunit II 0.70 MCAODC_22345 hflD high frequency lysogenization protein HflD — —
Klebsiella michiganensis M5al 0.67 BWI76_RS06495 cytochrome ubiquinol oxidase subunit II 0.70 BWI76_RS11310 lysogenization protein HflD — —
Escherichia coli ECRC99 0.67 KEDOAH_19605 cyoA cytochrome o ubiquinol oxidase subunit II 0.70 KEDOAH_24825 hflD high frequency lysogenization protein HflD — —
Escherichia coli ECRC98 0.67 JDDGAC_12015 cyoA cytochrome o ubiquinol oxidase subunit II 0.70 JDDGAC_06625 hflD high frequency lysogenization protein HflD low > 86
Enterobacter sp. TBS_079 0.67 MPMX20_01023 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.71 MPMX20_01816 High frequency lysogenization protein HflD low > 85
Escherichia coli ECRC100 0.67 OKFHMN_08360 cyoA cytochrome o ubiquinol oxidase subunit II 0.70 OKFHMN_00740 hflD high frequency lysogenization protein HflD — —
Escherichia coli ECRC102 0.67 NIAGMN_06415 cyoA cytochrome o ubiquinol oxidase subunit II 0.70 NIAGMN_24885 hflD high frequency lysogenization protein HflD — —
Enterobacter asburiae PDN3 0.66 EX28DRAFT_2539 cytochrome o ubiquinol oxidase subunit II 0.71 EX28DRAFT_1798 Uncharacterized protein involved in purine metabolism — —
Serratia liquefaciens MT49 0.66 IAI46_04985 cytochrome o ubiquinol oxidase subunit II 0.71 IAI46_10435 high frequency lysogenization protein HflD low > 86
Pantoea sp. MT58 0.66 IAI47_14680 cytochrome o ubiquinol oxidase subunit II 0.71 IAI47_11920 high frequency lysogenization protein HflD 0.61 33
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF4346 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.68 GFF3417 FIG002903: a protein of unknown function perhaps involved in purine metabolism low > 78
Erwinia tracheiphila SCR3 0.65 LU632_RS18375 cyoA cytochrome o ubiquinol oxidase subunit II 0.69 LU632_RS14580 hflD high frequency lysogenization protein HflD — —
Rahnella sp. WP5 0.65 EX31_RS22220 cytochrome o ubiquinol oxidase subunit II 0.71 EX31_RS24570 high frequency lysogenization protein HflD low > 89
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 0.35 Psyr_3191 Protein of unknown function DUF489 — —
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 0.35 Psyr_3191 Protein of unknown function DUF489 — —
Pseudomonas putida KT2440 0.56 PP_0812 cytochrome bo terminal oxidase subunit II 0.37 PP_4015 HflD-like high frequency lysogenization protein — —
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_4936 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.36 PfGW456L13_2638 FIG002903: a protein of unknown function perhaps involved in purine metabolism 0.49 46
Pseudomonas fluorescens SBW25 0.53 PFLU_RS25220 ubiquinol oxidase subunit II 0.34 PFLU_RS18585 high frequency lysogenization protein HflD 0.58 95
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS25220 ubiquinol oxidase subunit II 0.34 PFLU_RS18585 high frequency lysogenization protein HflD low > 109
Pseudomonas simiae WCS417 0.53 PS417_23390 ubiquinol oxidase subunit II 0.34 PS417_16545 DNA repair protein — —
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_16960 ubiquinol oxidase subunit II 0.35 AO356_22105 DNA repair protein — —
Pseudomonas sp. RS175 0.53 PFR28_00242 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.35 PFR28_02620 High frequency lysogenization protein HflD low > 88
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_5317 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.35 Pf6N2E2_285 FIG002903: a protein of unknown function perhaps involved in purine metabolism low > 103
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_15450 ubiquinol oxidase subunit II 0.35 AO353_27710 DNA repair protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_973 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.35 Pf1N1B4_4047 FIG002903: a protein of unknown function perhaps involved in purine metabolism low > 87
Alteromonas macleodii MIT1002 0.52 MIT1002_03929 Ubiquinol oxidase subunit 2 precursor 0.41 MIT1002_01827 High frequency lysogenization protein HflD low > 70
Shewanella loihica PV-4 0.51 Shew_0366 ubiquinol oxidase, subunit II (RefSeq) 0.39 Shew_1559 hypothetical protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.49 Shewana3_4031 ubiquinol oxidase, subunit II (RefSeq) 0.37 Shewana3_1746 hypothetical protein (RefSeq) low > 73
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS07625 ubiquinol oxidase subunit II 0.29 ABZR86_RS02180 high frequency lysogenization protein HflD low > 74
Acinetobacter radioresistens SK82 0.42 MPMX26_01162 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.19 MPMX26_01047 High frequency lysogenization protein HflD low > 36

Not shown: 16 genomes with orthologs for HER17_RS15875 only; 12 genomes with orthologs for HER17_RS11630 only