Conservation of cofitness between HER17_RS16015 and HER17_RS08230 in Pectobacterium carotovorum WPP14

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS16015 proline-specific permease ProY 1.0 HER17_RS08230 flagellar type III secretion system pore protein FliP 0.68 7
Dickeya dianthicola ME23 0.88 DZA65_RS05835 proline-specific permease ProY 0.89 DZA65_RS13945 flagellar type III secretion system pore protein FliP 0.45 75
Dickeya dianthicola 67-19 0.88 HGI48_RS05510 proline-specific permease ProY 0.89 HGI48_RS13460 flagellar type III secretion system pore protein FliP 0.46 66
Rahnella sp. WP5 0.85 EX31_RS22070 proline-specific permease ProY 0.75 EX31_RS09590 flagellar type III secretion system pore protein FliP low > 89
Pantoea sp. MT58 0.83 IAI47_14830 proline-specific permease ProY 0.84 IAI47_07980 flagellar type III secretion system pore protein FliP low > 76
Serratia liquefaciens MT49 0.83 IAI46_04800 proline-specific permease ProY 0.86 IAI46_15890 flagellar type III secretion system pore protein FliP low > 86
Dickeya dadantii 3937 0.82 DDA3937_RS05450 proline-specific permease ProY 0.90 DDA3937_RS13415 flagellar type III secretion system pore protein FliP low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF4300 Proline-specific permease proY 0.82 GFF4008 Flagellar biosynthesis protein FliP low > 78
Enterobacter asburiae PDN3 0.81 EX28DRAFT_2572 Gamma-aminobutyrate permease and related permeases 0.83 EX28DRAFT_0606 flagellar biosynthetic protein FliP low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_00989 Proline-specific permease ProY 0.83 MPMX20_02945 Flagellar biosynthetic protein FliP low > 85
Escherichia coli ECOR38 0.78 HEPCGN_07170 proY proline-specific permease ProY 0.82 HEPCGN_04025 fliP flagellar type III secretion system pore protein FliP low > 87
Escherichia coli Nissle 1917 0.78 ECOLIN_RS02425 proline-specific permease ProY 0.82 ECOLIN_RS11110 flagellar type III secretion system pore protein FliP — —
Escherichia coli ECRC98 0.78 JDDGAC_12185 proY proline-specific permease ProY 0.82 JDDGAC_00250 fliP flagellar type III secretion system pore protein FliP low > 86
Escherichia coli BW25113 0.78 b0402 proY predicted cryptic proline transporter (NCBI) 0.82 b1948 fliP flagellar biosynthesis protein P (NCBI) low > 76
Escherichia coli ECRC100 0.78 OKFHMN_08530 proY proline-specific permease ProY 0.82 OKFHMN_25665 fliP flagellar type III secretion system pore protein FliP low > 80
Escherichia coli ECRC101 0.78 MCAODC_27755 proY proline-specific permease ProY 0.82 MCAODC_19730 fliP flagellar type III secretion system pore protein FliP low > 87
Escherichia coli ECRC99 0.78 KEDOAH_19435 proY proline-specific permease ProY 0.82 KEDOAH_02430 fliP flagellar type III secretion system pore protein FliP — —
Escherichia coli ECRC62 0.78 BNILDI_22875 proY proline-specific permease ProY 0.82 BNILDI_15085 fliP flagellar type III secretion system pore protein FliP low > 75
Escherichia fergusonii Becca 0.78 EFB2_03655 Proline-specific permease ProY 0.82 EFB2_01998 Flagellar biosynthetic protein FliP low > 86
Escherichia coli ECRC102 0.78 NIAGMN_06585 proY proline-specific permease ProY 0.82 NIAGMN_02390 fliP flagellar type III secretion system pore protein FliP — —
Escherichia coli ECOR27 0.78 NOLOHH_01460 proY proline-specific permease ProY 0.82 NOLOHH_16295 fliP flagellar type III secretion system pore protein FliP low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_03274 Proline-specific permease ProY 0.82 OHPLBJKB_01781 Flagellar biosynthetic protein FliP low > 73
Erwinia tracheiphila SCR3 0.72 LU632_RS18885 proY proline-specific permease ProY 0.81 LU632_RS10525 fliP flagellar type III secretion system pore protein FliP low > 74
Pseudomonas simiae WCS417 0.64 PS417_01755 proline-specific permease 0.56 PS417_19740 flagellar biosynthesis protein flip low > 88
Pseudomonas fluorescens SBW25 0.64 PFLU_RS01810 amino acid permease 0.56 PFLU_RS21710 flagellar type III secretion system pore protein FliP low > 109
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS01810 amino acid permease 0.56 PFLU_RS21710 flagellar type III secretion system pore protein FliP low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_4834 histidine:proton symporter, AAT family 0.56 Psyr_3444 Flagellar transport protein FliP low > 86
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_4834 histidine:proton symporter, AAT family 0.56 Psyr_3444 Flagellar transport protein FliP — —
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_1580 Histidine transport protein (permease) 0.56 Pf1N1B4_3618 Flagellar biosynthesis protein FliP — —
Pseudomonas putida KT2440 0.63 PP_5031 proline (histidine) APC transporter 0.59 PP_4355 flagellar export apparatus subunit low > 96
Pseudomonas fluorescens FW300-N2E3 0.62 AO353_12275 histidine permease (from data) 0.57 AO353_18745 flagellar biosynthesis protein flip low > 101
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_318 Histidine transport protein (permease) 0.56 PfGW456L13_4339 Flagellar biosynthesis protein FliP low > 87
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS09765 amino acid permease 0.67 ABZR87_RS22210 flagellar type III secretion system pore protein FliP low > 80
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS05185 amino acid permease 0.60 ABZR86_RS20230 flagellar type III secretion system pore protein FliP low > 74
Pseudomonas sp. RS175 0.56 PFR28_03490 Proline-specific permease ProY 0.56 PFR28_00845 Flagellar biosynthetic protein FliP low > 88
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_17670 L-alanine and D-alanine permease (from data) 0.55 AO356_03770 flagellar biosynthesis protein flip low > 104
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_5459 D-serine/D-alanine/glycine transporter 0.55 Pf6N2E2_2580 Flagellar biosynthesis protein FliP low > 103
Rhodanobacter denitrificans MT42 0.53 LRK55_RS02640 amino acid permease 0.55 LRK55_RS13285 flagellar type III secretion system pore protein FliP low > 63
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS02890 amino acid permease 0.55 LRK54_RS13545 flagellar type III secretion system pore protein FliP low > 59
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_09870 Amino acid permease 0.52 OKGIIK_02795 fliP flagellar type III secretion system pore protein FliP low > 52

Not shown: 4 genomes with orthologs for HER17_RS16015 only; 35 genomes with orthologs for HER17_RS08230 only