Conservation of cofitness between HER17_RS12930 and HER17_RS06645 in Pectobacterium carotovorum WPP14

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12930 microcin C ABC transporter permease 1.0 HER17_RS06645 D-amino-acid transaminase 0.67 1
Dickeya dianthicola 67-19 0.87 HGI48_RS09220 ABC transporter permease subunit 0.73 HGI48_RS14760 D-amino-acid transaminase low > 71
Dickeya dadantii 3937 0.87 DDA3937_RS09180 ABC transporter permease subunit 0.73 DDA3937_RS14830 D-amino-acid transaminase low > 74
Dickeya dianthicola ME23 0.85 DZA65_RS09525 ABC transporter permease subunit 0.73 DZA65_RS15710 D-amino-acid transaminase low > 75
Rahnella sp. WP5 0.73 EX31_RS19140 ABC transporter permease subunit 0.58 EX31_RS09295 D-amino-acid transaminase low > 89
Azospirillum sp. SherDot2 0.64 MPMX19_02170 Inner membrane ABC transporter permease protein YejE 0.30 MPMX19_04003 D-alanine aminotransferase low > 112
Rhodospirillum rubrum S1H 0.63 Rru_A3168 Binding-protein-dependent transport systems inner membrane component (NCBI) 0.37 Rru_A1682 Aminotransferase, class IV (NCBI) — —
Rhizobium sp. OAE497 0.62 ABIE40_RS00625 ABC transporter permease 0.38 ABIE40_RS09105 D-amino-acid transaminase low > 107
Bosea sp. OAE506 0.61 ABIE41_RS23970 ABC transporter permease 0.52 ABIE41_RS21735 D-amino-acid transaminase 0.45 59
Rhodopseudomonas palustris CGA009 0.60 TX73_019115 ABC transporter permease 0.38 TX73_013435 D-amino-acid transaminase low > 86
Agrobacterium fabrum C58 0.58 Atu0189 ABC transporter, membrane spanning protein (peptide) 0.54 Atu5473 D-alanine aminotransferase low > 89
Sinorhizobium meliloti 1021 0.57 SMc02830 ABC transporter permease 0.42 SMa0093 Branched-chain amino acid aminotransferase — —
Dinoroseobacter shibae DFL-12 0.55 Dshi_0657 binding-protein-dependent transport systems inner membrane component (RefSeq) 0.54 Dshi_3150 aminotransferase class IV (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.53 PGA1_c30160 ABC transporter permease protein 0.54 PGA1_c30460 D-alanine aminotransferase Dat 0.45 19
Variovorax sp. SCN45 0.52 GFF227 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) 0.27 GFF3678 D-alanine aminotransferase (EC 2.6.1.21) low > 127
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_00562 microcin C transport system permease protein 0.26 H281DRAFT_02053 D-alanine transaminase low > 103
Paraburkholderia graminis OAS925 0.50 ABIE53_002548 microcin C transport system permease protein 0.28 ABIE53_000627 D-alanine transaminase low > 113
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS07165 peptide ABC transporter permease 0.27 BPHYT_RS02420 cytochrome C550 low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF4337 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.27 GFF2937 D-alanine aminotransferase (EC 2.6.1.21) low > 90
Ralstonia solanacearum GMI1000 0.49 RS_RS05860 ABC transporter permease 0.44 RS_RS20550 D-amino-acid transaminase low > 80
Ralstonia solanacearum PSI07 0.49 RPSI07_RS18330 ABC transporter permease 0.45 RPSI07_RS02705 D-amino-acid transaminase low > 81
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS13375 peptide ABC transporter permease 0.28 RR42_RS22950 cytochrome C550 low > 128
Ralstonia solanacearum UW163 0.48 UW163_RS12515 ABC transporter permease 0.44 UW163_RS19020 D-amino-acid transaminase — —
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS15045 ABC transporter permease 0.44 RALBFv3_RS20155 D-amino-acid transaminase low > 76
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS10690 ABC transporter permease 0.43 ABZR87_RS20740 D-amino-acid transaminase low > 80
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS17135 peptide ABC transporter permease 0.29 HSERO_RS23905 cytochrome C550 low > 78
Variovorax sp. OAS795 0.47 ABID97_RS16510 ABC transporter permease 0.28 ABID97_RS00490 D-amino acid aminotransferase low > 91

Not shown: 41 genomes with orthologs for HER17_RS12930 only; 13 genomes with orthologs for HER17_RS06645 only