Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS19675 | | TRAP transporter substrate-binding protein | 1.0 | HER17_RS06335 | | aldo/keto reductase | 0.61 | 3 |
Rahnella sp. WP5 | 0.80 | EX31_RS08010 | | TRAP transporter substrate-binding protein | 0.69 | EX31_RS20295 | | aldo/keto reductase | low | > 89 |
Pantoea sp. MT58 | 0.66 | IAI47_03230 | | TRAP transporter substrate-binding protein | 0.72 | IAI47_06880 | | aldo/keto reductase | low | > 76 |
Bosea sp. OAE506 | 0.35 | ABIE41_RS07830 | | TRAP transporter substrate-binding protein | 0.30 | ABIE41_RS04235 | | aldo/keto reductase | low | > 77 |
Agrobacterium fabrum C58 | 0.35 | Atu3137 | | C4-dicarboxylate-binding protein | 0.50 | Atu0263 | | oxidoreductase | low | > 89 |
Sinorhizobium meliloti 1021 | 0.34 | SM_b21353 | | periplasmic C4-dicarboxylate transport protein | 0.54 | SMc00374 | | oxidoreductase transmembrane protein | low | > 103 |
Variovorax sp. OAS795 | 0.33 | ABID97_RS10340 | | TRAP transporter substrate-binding protein | 0.65 | ABID97_RS14340 | | aldo/keto reductase | low | > 91 |
Azospirillum sp. SherDot2 | 0.33 | MPMX19_05801 | | Solute-binding protein | 0.66 | MPMX19_05383 | | 1-deoxyxylulose-5-phosphate synthase YajO | low | > 112 |
Paraburkholderia graminis OAS925 | 0.30 | ABIE53_006502 | | tripartite ATP-independent transporter DctP family solute receptor | 0.56 | ABIE53_000140 | | aryl-alcohol dehydrogenase-like predicted oxidoreductase | low | > 113 |
Caulobacter crescentus NA1000 Δfur | 0.30 | CCNA_01513 | | C4-dicarboxylate-binding protein | 0.50 | CCNA_02724 | | Aldo-keto reductase | low | > 67 |
Caulobacter crescentus NA1000 | 0.30 | CCNA_01513 | | C4-dicarboxylate-binding protein | 0.50 | CCNA_02724 | | Aldo-keto reductase | low | > 66 |
Paraburkholderia bryophila 376MFSha3.1 | 0.30 | H281DRAFT_05324 | | tripartite ATP-independent transporter solute receptor, DctP family | 0.57 | H281DRAFT_05727 | | Predicted oxidoreductase | low | > 103 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.30 | OHPLBJKB_03838 | | Solute-binding protein | 0.26 | OHPLBJKB_03257 | | Aldo-keto reductase IolS | low | > 73 |
Burkholderia phytofirmans PsJN | 0.29 | BPHYT_RS24175 | | C4-dicarboxylate ABC transporter | 0.58 | BPHYT_RS19080 | | NADP-dependent aryl-alcohol dehydrogenase | low | > 109 |
Escherichia coli ECRC62 | 0.29 | BNILDI_07130 | | Bacterial extracellular solute-binding protein, family 7 | 0.26 | BNILDI_22790 | yajO | 1-deoxyxylulose-5-phosphate synthase YajO | low | > 75 |
Klebsiella michiganensis M5al | 0.29 | BWI76_RS24125 | | hypothetical protein | 0.53 | BWI76_RS07350 | | alcohol dehydrogenase | low | > 92 |
Variovorax sp. SCN45 | 0.28 | GFF2918 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | 0.65 | GFF1024 | | Aldo/keto reductase, SCO4109 family | low | > 127 |
Escherichia coli Nissle 1917 | 0.28 | ECOLIN_RS17380 | | TRAP transporter substrate-binding protein | 0.26 | ECOLIN_RS02530 | | 1-deoxyxylulose-5-phosphate synthase YajO | — | — |
Lysobacter sp. OAE881 | 0.28 | ABIE51_RS02850 | | TRAP transporter substrate-binding protein | 0.56 | ABIE51_RS00630 | | aldo/keto reductase | low | > 62 |
Echinicola vietnamensis KMM 6221, DSM 17526 | 0.27 | Echvi_3629 | | tripartite ATP-independent periplasmic transporter solute receptor, DctP family | 0.49 | Echvi_4511 | | Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) | low | > 79 |
Xanthomonas campestris pv. campestris strain 8004 | 0.27 | Xcc-8004.201.1 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | 0.59 | Xcc-8004.348.1 | | Oxidoreductase | low | > 74 |
Serratia liquefaciens MT49 | 0.27 | IAI46_00375 | | TRAP transporter substrate-binding protein | 0.70 | IAI46_18965 | | aldo/keto reductase | low | > 86 |
Escherichia coli ECOR38 | 0.26 | HEPCGN_18535 | | Bacterial extracellular solute-binding protein, family 7 | 0.26 | HEPCGN_07055 | yajO | 1-deoxyxylulose-5-phosphate synthase YajO | low | > 87 |
Escherichia coli ECOR27 | 0.26 | NOLOHH_11100 | | Bacterial extracellular solute-binding protein, family 7 | 0.26 | NOLOHH_01375 | yajO | 1-deoxyxylulose-5-phosphate synthase YajO | low | > 75 |
Escherichia fergusonii Becca | 0.24 | EFB2_00227 | | 2,3-diketo-L-gulonate-binding periplasmic protein YiaO | 0.26 | EFB2_03638 | | 1-deoxyxylulose-5-phosphate synthase YajO | low | > 86 |
Escherichia coli BL21 | 0.24 | ECD_03431 | | 2,3-diketo-L-gulonate-binding periplasmic protein | 0.26 | ECD_00367 | | 2-carboxybenzaldehyde reductase | low | > 61 |
Escherichia coli BW25113 | 0.24 | b3579 | yiaO | predicted transporter (NCBI) | 0.26 | b0419 | yajO | putative NAD(P)H-dependent xylose reductase (VIMSS) | low | > 76 |
Herbaspirillum seropedicae SmR1 | 0.21 | HSERO_RS04240 | | C4-dicarboxylate ABC transporter | 0.24 | HSERO_RS01585 | | NADP-dependent oxidoreductase | low | > 78 |
Cupriavidus basilensis FW507-4G11 | 0.18 | RR42_RS10600 | | C4-dicarboxylate ABC transporter substrate-binding protein | 0.65 | RR42_RS21705 | | alcohol dehydrogenase | low | > 128 |
Rhodopseudomonas palustris CGA009 | 0.18 | TX73_010550 | | TRAP transporter substrate-binding protein | 0.29 | TX73_022470 | | aldo/keto reductase | low | > 86 |
Rhizobium sp. OAE497 | 0.17 | ABIE40_RS25820 | | sialic acid TRAP transporter substrate-binding protein SiaP | 0.50 | ABIE40_RS01170 | | aldo/keto reductase | low | > 107 |
Not shown: 29 genomes with orthologs for HER17_RS19675 only; 20 genomes with orthologs for HER17_RS06335 only