Conservation of cofitness between HER17_RS19675 and HER17_RS06335 in Pectobacterium carotovorum WPP14

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS19675 TRAP transporter substrate-binding protein 1.0 HER17_RS06335 aldo/keto reductase 0.61 3
Rahnella sp. WP5 0.80 EX31_RS08010 TRAP transporter substrate-binding protein 0.69 EX31_RS20295 aldo/keto reductase low > 89
Pantoea sp. MT58 0.66 IAI47_03230 TRAP transporter substrate-binding protein 0.72 IAI47_06880 aldo/keto reductase low > 76
Bosea sp. OAE506 0.35 ABIE41_RS07830 TRAP transporter substrate-binding protein 0.30 ABIE41_RS04235 aldo/keto reductase low > 77
Agrobacterium fabrum C58 0.35 Atu3137 C4-dicarboxylate-binding protein 0.50 Atu0263 oxidoreductase low > 89
Sinorhizobium meliloti 1021 0.34 SM_b21353 periplasmic C4-dicarboxylate transport protein 0.54 SMc00374 oxidoreductase transmembrane protein low > 103
Variovorax sp. OAS795 0.33 ABID97_RS10340 TRAP transporter substrate-binding protein 0.65 ABID97_RS14340 aldo/keto reductase low > 91
Azospirillum sp. SherDot2 0.33 MPMX19_05801 Solute-binding protein 0.66 MPMX19_05383 1-deoxyxylulose-5-phosphate synthase YajO low > 112
Paraburkholderia graminis OAS925 0.30 ABIE53_006502 tripartite ATP-independent transporter DctP family solute receptor 0.56 ABIE53_000140 aryl-alcohol dehydrogenase-like predicted oxidoreductase low > 113
Caulobacter crescentus NA1000 Δfur 0.30 CCNA_01513 C4-dicarboxylate-binding protein 0.50 CCNA_02724 Aldo-keto reductase low > 67
Caulobacter crescentus NA1000 0.30 CCNA_01513 C4-dicarboxylate-binding protein 0.50 CCNA_02724 Aldo-keto reductase low > 66
Paraburkholderia bryophila 376MFSha3.1 0.30 H281DRAFT_05324 tripartite ATP-independent transporter solute receptor, DctP family 0.57 H281DRAFT_05727 Predicted oxidoreductase low > 103
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_03838 Solute-binding protein 0.26 OHPLBJKB_03257 Aldo-keto reductase IolS low > 73
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS24175 C4-dicarboxylate ABC transporter 0.58 BPHYT_RS19080 NADP-dependent aryl-alcohol dehydrogenase low > 109
Escherichia coli ECRC62 0.29 BNILDI_07130 Bacterial extracellular solute-binding protein, family 7 0.26 BNILDI_22790 yajO 1-deoxyxylulose-5-phosphate synthase YajO low > 75
Klebsiella michiganensis M5al 0.29 BWI76_RS24125 hypothetical protein 0.53 BWI76_RS07350 alcohol dehydrogenase low > 92
Variovorax sp. SCN45 0.28 GFF2918 TRAP-type C4-dicarboxylate transport system, periplasmic component 0.65 GFF1024 Aldo/keto reductase, SCO4109 family low > 127
Escherichia coli Nissle 1917 0.28 ECOLIN_RS17380 TRAP transporter substrate-binding protein 0.26 ECOLIN_RS02530 1-deoxyxylulose-5-phosphate synthase YajO
Lysobacter sp. OAE881 0.28 ABIE51_RS02850 TRAP transporter substrate-binding protein 0.56 ABIE51_RS00630 aldo/keto reductase low > 62
Echinicola vietnamensis KMM 6221, DSM 17526 0.27 Echvi_3629 tripartite ATP-independent periplasmic transporter solute receptor, DctP family 0.49 Echvi_4511 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) low > 79
Xanthomonas campestris pv. campestris strain 8004 0.27 Xcc-8004.201.1 TRAP-type C4-dicarboxylate transport system, periplasmic component 0.59 Xcc-8004.348.1 Oxidoreductase low > 74
Serratia liquefaciens MT49 0.27 IAI46_00375 TRAP transporter substrate-binding protein 0.70 IAI46_18965 aldo/keto reductase low > 86
Escherichia coli ECOR38 0.26 HEPCGN_18535 Bacterial extracellular solute-binding protein, family 7 0.26 HEPCGN_07055 yajO 1-deoxyxylulose-5-phosphate synthase YajO low > 87
Escherichia coli ECOR27 0.26 NOLOHH_11100 Bacterial extracellular solute-binding protein, family 7 0.26 NOLOHH_01375 yajO 1-deoxyxylulose-5-phosphate synthase YajO low > 75
Escherichia fergusonii Becca 0.24 EFB2_00227 2,3-diketo-L-gulonate-binding periplasmic protein YiaO 0.26 EFB2_03638 1-deoxyxylulose-5-phosphate synthase YajO low > 86
Escherichia coli BL21 0.24 ECD_03431 2,3-diketo-L-gulonate-binding periplasmic protein 0.26 ECD_00367 2-carboxybenzaldehyde reductase low > 61
Escherichia coli BW25113 0.24 b3579 yiaO predicted transporter (NCBI) 0.26 b0419 yajO putative NAD(P)H-dependent xylose reductase (VIMSS) low > 76
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS04240 C4-dicarboxylate ABC transporter 0.24 HSERO_RS01585 NADP-dependent oxidoreductase low > 78
Cupriavidus basilensis FW507-4G11 0.18 RR42_RS10600 C4-dicarboxylate ABC transporter substrate-binding protein 0.65 RR42_RS21705 alcohol dehydrogenase low > 128
Rhodopseudomonas palustris CGA009 0.18 TX73_010550 TRAP transporter substrate-binding protein 0.29 TX73_022470 aldo/keto reductase low > 86
Rhizobium sp. OAE497 0.17 ABIE40_RS25820 sialic acid TRAP transporter substrate-binding protein SiaP 0.50 ABIE40_RS01170 aldo/keto reductase low > 107

Not shown: 29 genomes with orthologs for HER17_RS19675 only; 20 genomes with orthologs for HER17_RS06335 only