Conservation of cofitness between HER17_RS21560 and HER17_RS04905 in Pectobacterium carotovorum WPP14

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS21560 response regulator 1.0 HER17_RS04905 type VI secretion system membrane subunit TssM 0.56 19
Dickeya dianthicola 67-19 0.82 HGI48_RS21345 response regulator 0.89 HGI48_RS08010 type VI secretion system membrane subunit TssM low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS22325 response regulator 0.90 DZA65_RS08605 type VI secretion system membrane subunit TssM low > 75
Pantoea sp. MT58 0.79 IAI47_00340 response regulator 0.12 IAI47_11680 type VI secretion system membrane subunit TssM low > 76
Enterobacter asburiae PDN3 0.74 EX28DRAFT_3057 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.11 EX28DRAFT_0790 type VI secretion protein IcmF low > 76
Enterobacter sp. TBS_079 0.72 MPMX20_03863 Transcriptional regulatory protein QseB 0.11 MPMX20_02678 hypothetical protein low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF3138 Two-component system response regulator QseB 0.04 GFF4068 IcmF-related protein low > 78
Escherichia coli ECRC102 0.71 NIAGMN_16645 Transcriptional regulatory protein QseB 0.39 NIAGMN_07770 tssM type VI secretion system membrane subunit TssM — —
Escherichia coli ECRC99 0.71 KEDOAH_09265 Transcriptional regulatory protein QseB 0.39 KEDOAH_18235 tssM type VI secretion system membrane subunit TssM — —
Escherichia coli ECRC98 0.71 JDDGAC_22515 Transcriptional regulatory protein QseB 0.39 JDDGAC_13515 tssM type VI secretion system membrane subunit TssM low > 86
Escherichia coli ECOR27 0.71 NOLOHH_10660 Transcriptional regulatory protein QseB 0.40 NOLOHH_02275 tssM type VI secretion system membrane subunit TssM low > 75
Escherichia coli ECRC100 0.71 OKFHMN_18880 Transcriptional regulatory protein QseB 0.39 OKFHMN_09920 tssM type VI secretion system membrane subunit TssM low > 80
Escherichia coli ECRC101 0.71 MCAODC_09395 Transcriptional regulatory protein QseB 0.39 MCAODC_00435 tssM type VI secretion system membrane subunit TssM low > 87
Escherichia fergusonii Becca 0.70 EFB2_00788 Transcriptional regulatory protein QseB 0.40 EFB2_03823 hypothetical protein low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_00677 Transcriptional regulatory protein QseB 0.40 OHPLBJKB_03439 hypothetical protein low > 73
Paraburkholderia graminis OAS925 0.55 ABIE53_003418 two-component system response regulator QseB 0.11 ABIE53_003925 type VI secretion system protein ImpL low > 113
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS16220 transcriptional regulator 0.08 BPHYT_RS04540 type VI secretion protein VasK — —
Paraburkholderia bryophila 376MFSha3.1 0.54 H281DRAFT_04180 two component transcriptional regulator, winged helix family 0.06 H281DRAFT_05373 type VI secretion system protein ImpL low > 103
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS02475 response regulator 0.08 QEN71_RS34515 type VI secretion system membrane subunit TssM low > 153
Pseudomonas sp. S08-1 0.51 OH686_04665 Two-component system response regulator QseB 0.13 OH686_12780 T6SS component TssM (IcmF/VasK) low > 80
Variovorax sp. SCN45 0.51 GFF1175 Two-component system response regulator QseB 0.12 GFF6222 T6SS component TssM (IcmF/VasK) low > 127
Variovorax sp. OAS795 0.50 ABID97_RS14955 response regulator 0.13 ABID97_RS04995 type VI secretion system membrane subunit TssM low > 91
Pseudomonas sp. RS175 0.50 PFR28_02328 Transcriptional regulatory protein QseB 0.12 PFR28_04450 hypothetical protein low > 88
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS37390 XRE family transcriptional regulator 0.10 RR42_RS03585 type VI secretion protein VasK low > 128
Pseudomonas simiae WCS417 0.50 PS417_13595 XRE family transcriptional regulator 0.12 PS417_27920 type VI secretion protein IcmF low > 88
Pseudomonas fluorescens SBW25-INTG 0.49 PFLU_RS15245 response regulator 0.13 PFLU_RS29600 type VI secretion system membrane subunit TssM low > 109
Pseudomonas fluorescens SBW25 0.49 PFLU_RS15245 response regulator 0.13 PFLU_RS29600 type VI secretion system membrane subunit TssM low > 109
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_23845 XRE family transcriptional regulator 0.12 AO356_12315 type VI secretion protein IcmF low > 104
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_1539 Two-component system response regulator QseB 0.12 Pf6N2E2_4341 IcmF-related protein low > 103
Pseudomonas fluorescens FW300-N1B4 0.49 Pf1N1B4_4454 Two-component system response regulator QseB 0.13 Pf1N1B4_2070 IcmF-related protein — —
Pseudomonas putida KT2440 0.48 PP_2713 DNA-binding response regulator 0.28 PP_4071 conserved membrane protein of unknown function low > 96
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS22890 response regulator transcription factor 0.09 ABZR87_RS13865 type VI secretion system membrane subunit TssM low > 80
Pseudomonas stutzeri RCH2 0.48 Psest_3476 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.13 Psest_4246 type VI secretion protein IcmF low > 67
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_19370 transcriptional regulator 0.13 AO353_09545 type VI secretion protein IcmF low > 101
Acinetobacter radioresistens SK82 0.44 MPMX26_03174 Transcriptional regulatory protein QseB 0.06 MPMX26_00969 hypothetical protein low > 36
Marinobacter adhaerens HP15 0.41 HP15_3968 two component transcriptional regulator, winged helix family 0.33 HP15_3463 type VI secretion protein IcmF low > 73

Not shown: 28 genomes with orthologs for HER17_RS21560 only; 5 genomes with orthologs for HER17_RS04905 only