Conservation of cofitness between HER17_RS00665 and HER17_RS02745 in Pectobacterium carotovorum WPP14

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00665 envelope stress response regulator transcription factor CpxR 1.0 HER17_RS02745 energy-dependent translational throttle protein EttA 0.82 10
Pantoea sp. MT58 0.92 IAI47_00760 envelope stress response regulator transcription factor CpxR 0.95 IAI47_16325 energy-dependent translational throttle protein EttA low > 76
Erwinia tracheiphila SCR3 0.92 LU632_RS21855 cpxR envelope stress response regulator transcription factor CpxR 0.93 LU632_RS02565 ettA energy-dependent translational throttle protein EttA low > 74
Rahnella sp. WP5 0.90 EX31_RS14320 envelope stress response regulator transcription factor CpxR 0.95 EX31_RS04000 energy-dependent translational throttle protein EttA low > 89
Dickeya dadantii 3937 0.89 DDA3937_RS00780 envelope stress response regulator transcription factor CpxR 0.92 DDA3937_RS18460 energy-dependent translational throttle protein EttA — —
Dickeya dianthicola ME23 0.88 DZA65_RS21610 envelope stress response regulator transcription factor CpxR 0.92 DZA65_RS19530 energy-dependent translational throttle protein EttA low > 75
Dickeya dianthicola 67-19 0.88 HGI48_RS20595 envelope stress response regulator transcription factor CpxR 0.92 HGI48_RS18390 energy-dependent translational throttle protein EttA low > 71
Enterobacter sp. TBS_079 0.86 MPMX20_04556 Transcriptional regulatory protein CpxR 0.96 MPMX20_00698 Energy-dependent translational throttle protein EttA low > 85
Enterobacter asburiae PDN3 0.86 EX28DRAFT_4387 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.95 EX28DRAFT_3601 ATP-binding cassette protein, ChvD family low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF2280 Copper-sensing two-component system response regulator CpxR 0.95 GFF1059 ABC transporter, ATP-binding protein 0.77 52
Escherichia coli ECRC100 0.85 OKFHMN_13845 cpxR envelope stress response regulator transcription factor CpxR 0.95 OKFHMN_11175 ettA energy-dependent translational throttle protein EttA low > 80
Escherichia coli ECRC62 0.85 BNILDI_05545 cpxR envelope stress response regulator transcription factor CpxR 0.95 BNILDI_08090 ettA energy-dependent translational throttle protein EttA low > 75
Escherichia coli ECRC98 0.85 JDDGAC_17470 cpxR envelope stress response regulator transcription factor CpxR 0.95 JDDGAC_14770 ettA energy-dependent translational throttle protein EttA 0.89 27
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_04138 Transcriptional regulatory protein CpxR 0.95 OHPLBJKB_03670 Energy-dependent translational throttle protein EttA low > 73
Escherichia coli ECRC99 0.85 KEDOAH_14310 cpxR envelope stress response regulator transcription factor CpxR 0.95 KEDOAH_16980 ettA energy-dependent translational throttle protein EttA — —
Escherichia coli ECRC101 0.85 MCAODC_04345 cpxR envelope stress response regulator transcription factor CpxR 0.95 MCAODC_01690 ettA energy-dependent translational throttle protein EttA low > 87
Klebsiella michiganensis M5al 0.85 BWI76_RS00720 DNA-binding response regulator 0.95 BWI76_RS04175 energy-dependent translational throttle protein EttA low > 92
Escherichia coli ECRC102 0.85 NIAGMN_11600 cpxR envelope stress response regulator transcription factor CpxR 0.95 NIAGMN_09025 ettA energy-dependent translational throttle protein EttA — —
Escherichia coli BL21 0.85 ECD_03798 response regulator in two-component regulatory system with CpxA 0.95 ECD_04267 energy-dependent translational throttle A low > 61
Escherichia coli BW25113 0.85 b3912 cpxR DNA-binding response regulator in two-component regulatory system with CpxA (NCBI) 0.95 b4391 yjjK fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) low > 76
Escherichia coli ECOR27 0.85 NOLOHH_05980 cpxR envelope stress response regulator transcription factor CpxR 0.95 NOLOHH_03505 ettA energy-dependent translational throttle protein EttA 0.76 5
Escherichia coli Nissle 1917 0.85 ECOLIN_RS22540 envelope stress response regulator transcription factor CpxR 0.95 ECOLIN_RS25205 energy-dependent translational throttle protein EttA — —
Escherichia coli ECOR38 0.85 HEPCGN_12490 cpxR envelope stress response regulator transcription factor CpxR 0.95 HEPCGN_09180 ettA energy-dependent translational throttle protein EttA 0.78 74
Escherichia fergusonii Becca 0.85 EFB2_04705 Transcriptional regulatory protein CpxR 0.95 EFB2_04053 Energy-dependent translational throttle protein EttA low > 86
Serratia liquefaciens MT49 0.84 IAI46_24660 envelope stress response regulator transcription factor CpxR 0.95 IAI46_02965 energy-dependent translational throttle protein EttA 0.60 74
Vibrio cholerae E7946 ATCC 55056 0.56 CSW01_13590 DNA-binding response regulator 0.82 CSW01_03650 energy-dependent translational throttle protein EttA low > 62
Shewanella loihica PV-4 0.54 Shew_3570 two component transcriptional regulator (RefSeq) 0.83 Shew_1183 putative ABC transporter ATP-binding protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.52 Sama_3432 response regulator receiver protein (RefSeq) 0.83 Sama_1013 putative ABC transporter ATP-binding protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.50 Shewana3_0253 two component transcriptional regulator (RefSeq) 0.84 Shewana3_1093 putative ABC transporter ATP-binding protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.50 SO4477 cpxR transcriptional regulatory protein CpxR (NCBI ptt file) 0.83 SO3472 ABC transporter, ATP-binding protein (NCBI ptt file) low > 76
Dyella japonica UNC79MFTsu3.2 0.48 ABZR86_RS07815 response regulator 0.75 ABZR86_RS10725 energy-dependent translational throttle protein EttA — —
Alteromonas macleodii MIT1002 0.47 MIT1002_00477 Response regulator ArlR 0.78 MIT1002_02704 putative ABC transporter ATP-binding protein low > 70
Pseudomonas stutzeri RCH2 0.40 Psest_1884 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.75 Psest_3433 ATP-binding cassette protein, ChvD family low > 67
Pseudomonas sp. S08-1 0.39 OH686_20775 Two-component transcriptional response regulator, LuxR family 0.76 OH686_16240 Energy-dependent translational throttle protein EttA low > 80
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_4409 DNA-binding response regulator 0.75 PfGW456L13_1453 Glutathione-regulated potassium-efflux system ATP-binding protein low > 87
Pseudomonas sp. RS175 0.39 PFR28_03323 Transcriptional regulatory protein CpxR 0.75 PFR28_03784 Energy-dependent translational throttle protein EttA low > 88
Rhodospirillum rubrum S1H 0.34 Rru_A3422 Two component Transcriptional regulator, Winged helix family (NCBI) 0.60 Rru_A1527 ABC transporter component (NCBI) — —
Dinoroseobacter shibae DFL-12 0.34 Dshi_0212 two component transcriptional regulator, winged helix family (RefSeq) 0.59 Dshi_2197 ABC transporter related (RefSeq) low > 64

Not shown: 1 genomes with orthologs for HER17_RS00665 only; 62 genomes with orthologs for HER17_RS02745 only