Conservation of cofitness between HER17_RS04200 and HER17_RS01025 in Pectobacterium carotovorum WPP14

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS04200 7-carboxy-7-deazaguanine synthase QueE 1.0 HER17_RS01025 sugar ABC transporter ATP-binding protein 0.67 8
Serratia liquefaciens MT49 0.86 IAI46_03675 7-carboxy-7-deazaguanine synthase QueE 0.75 IAI46_24400 sugar ABC transporter ATP-binding protein low > 86
Dickeya dadantii 3937 0.86 DDA3937_RS16970 7-carboxy-7-deazaguanine synthase QueE 0.67 DDA3937_RS16310 sugar ABC transporter ATP-binding protein low > 74
Escherichia coli ECRC98 0.85 JDDGAC_23965 queE 7-carboxy-7-deazaguanine synthase QueE 0.67 JDDGAC_15600 ytfR Galactofuranose transporter ATP-binding protein YtfR low > 86
Escherichia coli ECRC99 0.85 KEDOAH_07830 queE 7-carboxy-7-deazaguanine synthase QueE 0.67 KEDOAH_16195 ytfR Galactofuranose transporter ATP-binding protein YtfR — —
Escherichia coli BL21 0.85 ECD_02622 7-carboxy-7-deazaguanine synthase; queosine biosynthesis 0.67 ECD_04097 putative sugar ABC transporter ATPase low > 61
Escherichia coli ECRC62 0.85 BNILDI_10675 queE 7-carboxy-7-deazaguanine synthase QueE 0.67 BNILDI_07295 ytfR Galactofuranose transporter ATP-binding protein YtfR low > 75
Escherichia coli ECRC100 0.85 OKFHMN_20300 queE 7-carboxy-7-deazaguanine synthase QueE 0.67 OKFHMN_11960 ytfR Galactofuranose transporter ATP-binding protein YtfR low > 80
Escherichia coli BW25113 0.85 b2777 ygcF hypothetical protein (NCBI) 0.67 b4485 ytfR predicted sugar transporter subunit: ATP-binding component of ABC superfamily (NCBI) low > 76
Escherichia coli ECRC102 0.85 NIAGMN_18070 queE 7-carboxy-7-deazaguanine synthase QueE 0.67 NIAGMN_09810 ytfR Galactofuranose transporter ATP-binding protein YtfR — —
Klebsiella michiganensis M5al 0.85 BWI76_RS22780 7-carboxy-7-deazaguanine synthase QueE 0.67 BWI76_RS02800 ABC transporter low > 92
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_00957 7-carboxy-7-deazaguanine synthase 0.67 OHPLBJKB_03806 Fructose import ATP-binding protein FruK low > 73
Escherichia coli ECOR27 0.85 NOLOHH_12170 queE 7-carboxy-7-deazaguanine synthase QueE 0.67 NOLOHH_04220 ytfR Galactofuranose transporter ATP-binding protein YtfR low > 75
Escherichia coli ECOR38 0.85 HEPCGN_19205 queE 7-carboxy-7-deazaguanine synthase QueE 0.67 HEPCGN_10160 ytfR Galactofuranose transporter ATP-binding protein YtfR low > 87
Escherichia fergusonii Becca 0.85 EFB2_01141 7-carboxy-7-deazaguanine synthase 0.67 EFB2_04304 Fructose import ATP-binding protein FruK low > 86
Escherichia coli Nissle 1917 0.85 ECOLIN_RS15475 7-carboxy-7-deazaguanine synthase QueE 0.67 ECOLIN_RS24540 galactofuranose ABC transporter, ATP-binding protein YtfR low > 55
Enterobacter sp. TBS_079 0.84 MPMX20_03645 7-carboxy-7-deazaguanine synthase 0.66 MPMX20_00509 Fructose import ATP-binding protein FruK low > 85
Enterobacter asburiae PDN3 0.84 EX28DRAFT_2855 putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 0.66 EX28DRAFT_3414 ABC-type sugar transport system, ATPase component low > 76
Rahnella sp. WP5 0.83 EX31_RS07920 7-carboxy-7-deazaguanine synthase QueE 0.78 EX31_RS14955 sugar ABC transporter ATP-binding protein low > 89
Pantoea sp. MT58 0.80 IAI47_04140 7-carboxy-7-deazaguanine synthase QueE 0.65 IAI47_10420 sugar ABC transporter ATP-binding protein low > 76
Dickeya dianthicola ME23 0.79 DZA65_RS18110 7-carboxy-7-deazaguanine synthase QueE 0.67 DZA65_RS17495 sugar ABC transporter ATP-binding protein low > 75
Dickeya dianthicola 67-19 0.79 HGI48_RS17035 7-carboxy-7-deazaguanine synthase QueE 0.67 HGI48_RS16405 sugar ABC transporter ATP-binding protein low > 71
Shewanella sp. ANA-3 0.61 Shewana3_2163 radical activating enzyme (RefSeq) 0.49 Shewana3_2074 L-arabinose ABC transporter, ATPase component AraV (from data) low > 73
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS41925 7-carboxy-7-deazaguanine synthase QueE 0.45 QEN71_RS09125 sugar ABC transporter ATP-binding protein low > 153
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS01505 7-cyano-7-deazaguanine reductase 0.43 BPHYT_RS23875 sugar ABC transporter ATP-binding protein low > 109
Paraburkholderia graminis OAS925 0.21 ABIE53_000397 7-carboxy-7-deazaguanine synthase 0.43 ABIE53_006559 monosaccharide-transporting ATPase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.20 H281DRAFT_02231 7-carboxy-7-deazaguanine synthase, Cx14CxxC type 0.42 H281DRAFT_05270 monosaccharide ABC transporter ATP-binding protein, CUT2 family — —
Ralstonia sp. UNC404CL21Col 0.19 ABZR87_RS12145 7-carboxy-7-deazaguanine synthase 0.46 ABZR87_RS18350 sugar ABC transporter ATP-binding protein low > 80
Azospirillum brasilense Sp245 0.19 AZOBR_RS04155 radical SAM protein 0.59 AZOBR_RS31210 sugar ABC transporter ATP-binding protein low > 97
Herbaspirillum seropedicae SmR1 0.18 HSERO_RS11035 7-cyano-7-deazaguanine reductase 0.46 HSERO_RS05175 sugar ABC transporter ATP-binding protein low > 78
Variovorax sp. SCN45 0.17 GFF2577 7-carboxy-7-deazaguanine synthase (EC 4.3.99.3) 0.45 GFF5197 Galactofuranose ABC transporter, ATP-binding protein — —
Dyella japonica UNC79MFTsu3.2 0.16 ABZR86_RS10790 7-carboxy-7-deazaguanine synthase QueE 0.40 ABZR86_RS04100 sugar ABC transporter ATP-binding protein low > 74
Acidovorax sp. GW101-3H11 0.16 Ac3H11_3825 Queuosine Biosynthesis QueE Radical SAM 0.43 Ac3H11_607 Predicted L-arabinose ABC transport system, ATP-binding protein — —
Variovorax sp. OAS795 0.16 ABID97_RS07425 7-carboxy-7-deazaguanine synthase 0.45 ABID97_RS06855 sugar ABC transporter ATP-binding protein — —

Not shown: 50 genomes with orthologs for HER17_RS04200 only; 4 genomes with orthologs for HER17_RS01025 only