Conservation of cofitness between GFF4054 and GFF864 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF4054 ClpB protein 1.0 GFF864 NADPH:quinone oxidoreductase 2 0.62 2
Cupriavidus basilensis FW507-4G11 0.62 RR42_RS03510 ATPase AAA 0.15 RR42_RS25185 epimerase low > 128
Ralstonia sp. UNC404CL21Col 0.60 ABZR87_RS13930 type VI secretion system ATPase TssH 0.12 ABZR87_RS08360 NmrA family NAD(P)-binding protein low > 80
Paraburkholderia sabiae LMG 24235 0.60 QEN71_RS34560 type VI secretion system ATPase TssH 0.11 QEN71_RS31265 NmrA family NAD(P)-binding protein low > 153
Erwinia tracheiphila SCR3 0.54 LU632_RS00685 tssH type VI secretion system ATPase TssH 0.55 LU632_RS23130 SDR family oxidoreductase low > 74
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_4327 ClpB protein 0.54 Pf6N2E2_4112 NADPH:quinone oxidoreductase 2 low > 103
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_12245 ClpV1 family T6SS ATPase 0.52 AO356_11240 quinone oxidoreductase low > 104
Enterobacter sp. TBS_079 0.50 MPMX20_02660 Protein ClpV1 0.74 MPMX20_00489 Quinone oxidoreductase 2 low > 85
Enterobacter asburiae PDN3 0.50 EX28DRAFT_0807 type VI secretion ATPase, ClpV1 family 0.72 EX28DRAFT_3398 Predicted nucleoside-diphosphate-sugar epimerases low > 76
Pantoea sp. MT58 0.49 IAI47_11580 type VI secretion system ATPase TssH 0.64 IAI47_03460 SDR family oxidoreductase low > 76
Pseudomonas sp. RS175 0.49 PFR28_04464 Protein ClpV1 0.53 PFR28_04679 Quinone oxidoreductase 2 low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.41 Psyr_4958 AAA ATPase, central region:Clp, N terminal:Clp, N terminal 0.54 Psyr_2311 conserved hypothetical protein low > 86
Pseudomonas syringae pv. syringae B728a 0.41 Psyr_4958 AAA ATPase, central region:Clp, N terminal:Clp, N terminal 0.54 Psyr_2311 conserved hypothetical protein low > 86
Rahnella sp. WP5 0.40 EX31_RS01880 type VI secretion system ATPase TssH 0.63 EX31_RS02230 SDR family oxidoreductase low > 89
Ralstonia solanacearum GMI1000 0.40 RS_RS20700 type VI secretion system ATPase TssH 0.18 RS_RS21165 NAD(P)-dependent oxidoreductase low > 80
Ralstonia solanacearum PSI07 0.39 RPSI07_RS02950 type VI secretion system ATPase TssH 0.16 RPSI07_RS03555 NAD(P)-dependent oxidoreductase low > 81
Ralstonia solanacearum IBSBF1503 0.39 RALBFv3_RS20025 type VI secretion system ATPase TssH 0.18 RALBFv3_RS19655 NAD(P)-dependent oxidoreductase low > 76
Ralstonia solanacearum UW163 0.39 UW163_RS19150 type VI secretion system ATPase TssH 0.18 UW163_RS19520 NAD(P)-dependent oxidoreductase — —
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_05369 type VI secretion system protein VasG 0.41 H281DRAFT_00037 NAD(P)H dehydrogenase (quinone) low > 103
Escherichia fergusonii Becca 0.37 EFB2_01093 Protein ClpV1 0.80 EFB2_04317 Quinone oxidoreductase 2 low > 86
Escherichia coli Nissle 1917 0.37 ECOLIN_RS15725 type VI secretion system ATPase TssH 0.79 ECOLIN_RS24465 NAD(P)H:quinone oxidoreductase low > 52
Marinobacter adhaerens HP15 0.37 HP15_3467 type VI secretion ATPase, ClpV1 family 0.11 HP15_1673 NmrA family protein low > 73
Agrobacterium fabrum C58 0.36 Atu4344 ATP-dependent Clp protease, ATP-binding subunit 0.15 Atu0949 hypothetical protein low > 89
Dickeya dadantii 3937 0.35 DDA3937_RS07060 type VI secretion system ATPase TssH 0.60 DDA3937_RS10835 SDR family oxidoreductase low > 74
Dickeya dianthicola 67-19 0.35 HGI48_RS07990 type VI secretion system ATPase TssH 0.59 HGI48_RS10790 SDR family oxidoreductase low > 71
Dickeya dianthicola ME23 0.34 DZA65_RS08585 type VI secretion system ATPase TssH 0.59 DZA65_RS11255 SDR family oxidoreductase low > 75
Azospirillum brasilense Sp245 0.34 AZOBR_RS21220 ATPase 0.52 AZOBR_RS31325 NmrA family transcriptional regulator low > 97
Pectobacterium carotovorum WPP14 0.34 HER17_RS04885 type VI secretion system ATPase TssH 0.66 HER17_RS21790 SDR family oxidoreductase low > 75
Azospirillum sp. SherDot2 0.34 MPMX19_03417 Protein ClpV1 0.15 MPMX19_03551 NAD(P)H azoreductase low > 112
Escherichia coli ECOR27 0.33 NOLOHH_02260 tssH type VI secretion system ATPase TssH 0.76 NOLOHH_04315 qorB NAD(P)H:quinone oxidoreductase low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_03436 Protein ClpV1 0.76 OHPLBJKB_03822 Quinone oxidoreductase 2 low > 73
Escherichia coli ECRC102 0.32 NIAGMN_07750 tssH type VI secretion system ATPase TssH 0.76 NIAGMN_09905 qorB NAD(P)H:quinone oxidoreductase — —
Escherichia coli ECRC99 0.32 KEDOAH_18250 tssH type VI secretion system ATPase TssH 0.76 KEDOAH_16100 qorB NAD(P)H:quinone oxidoreductase — —
Escherichia coli ECRC101 0.32 MCAODC_00420 tssH type VI secretion system ATPase TssH 0.76 MCAODC_02570 qorB NAD(P)H:quinone oxidoreductase — —
Escherichia coli ECRC101 0.32 OKFHMN_09900 tssH type VI secretion system ATPase TssH 0.76 OKFHMN_12055 qorB NAD(P)H:quinone oxidoreductase — —
Escherichia coli ECRC98 0.32 JDDGAC_13500 tssH type VI secretion system ATPase TssH 0.76 JDDGAC_15695 qorB NAD(P)H:quinone oxidoreductase — —

Not shown: 16 genomes with orthologs for GFF4054 only; 18 genomes with orthologs for GFF864 only