Conservation of cofitness between PS417_19230 and PS417_04020 in Pseudomonas simiae WCS417

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_19230 asparagine synthase 1.0 PS417_04020 glycine/betaine ABC transporter substrate-binding protein 0.24 6
Pseudomonas fluorescens SBW25 0.98 PFLU_RS21200 N-acetylglutaminylglutamine amidotransferase 0.96 PFLU_RS04060 glycine betaine ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS21200 N-acetylglutaminylglutamine amidotransferase 0.96 PFLU_RS04060 glycine betaine ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.95 Pf1N1B4_374 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) 0.85 Pf1N1B4_1132 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation low > 87
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_2154 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) 0.85 PfGW456L13_5063 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation low > 87
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_03575 asparagine synthase 0.84 AO356_07295 glycine/betaine ABC transporter substrate-binding protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_2542 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) 0.85 Pf6N2E2_3331 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation low > 103
Pseudomonas syringae pv. syringae B728a 0.92 Psyr_3747 asparagine synthase (glutamine-hydrolysing) 0.80 Psyr_4251 Substrate-binding region of ABC-type glycine betaine transport system low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.92 Psyr_3747 asparagine synthase (glutamine-hydrolysing) 0.80 Psyr_4251 Substrate-binding region of ABC-type glycine betaine transport system low > 86
Pseudomonas sp. RS175 0.90 PFR28_00883 Asparagine synthetase [glutamine-hydrolyzing] 1 0.82 PFR28_00116 Osmoprotectant-binding protein OsmX low > 88
Pseudomonas putida KT2440 0.87 PP_1750 asparagine synthetase 0.70 PP_0870 putative Glycine betaine/carnitine/choline ABC transporter, periplasmic binding protein low > 96
Azospirillum brasilense Sp245 0.60 AZOBR_RS22535 asparagine synthase 0.18 AZOBR_RS15770 osmoprotectant uptake system substrate-binding protein low > 97
Rhodospirillum rubrum S1H 0.57 Rru_A1989 Asparagine synthase, glutamine-hydrolyzing (NCBI) 0.21 Rru_A2385 Substrate-binding region of ABC-type glycine betaine transport system (NCBI) low > 58
Azospirillum sp. SherDot2 0.56 MPMX19_04123 Asparagine synthetase [glutamine-hydrolyzing] 1 0.18 MPMX19_05108 Glycine betaine-binding protein YehZ low > 112
Sinorhizobium meliloti 1021 0.56 SM_b20481 asparagine synthetase (glutamine amidotransferase) protein 0.36 SMa1462 ABC transporter low > 103
Marinobacter adhaerens HP15 0.25 HP15_1914 asparagine synthase, glutamine-hydrolyzing 0.17 HP15_991 substrate-binding region of ABC-type glycine betaine transport system low > 73
Herbaspirillum seropedicae SmR1 0.23 HSERO_RS21060 hypothetical protein 0.47 HSERO_RS08535 glycine/betaine ABC transporter substrate-binding protein 0.77 13
Serratia liquefaciens MT49 0.13 IAI46_06065 asparagine synthase B 0.20 IAI46_07365 ABC transporter substrate-binding protein low > 86
Klebsiella michiganensis M5al 0.13 BWI76_RS08180 asparagine synthase B 0.21 BWI76_RS19505 ABC transporter substrate-binding protein low > 92
Enterobacter asburiae PDN3 0.13 EX28DRAFT_2301 asparagine synthase (glutamine-hydrolyzing) 0.40 EX28DRAFT_1488 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) low > 76
Enterobacter sp. TBS_079 0.13 MPMX20_01320 Asparagine synthetase B [glutamine-hydrolyzing] 0.41 MPMX20_02068 Osmoprotectant-binding protein OsmX low > 85
Rahnella sp. WP5 0.13 EX31_RS23245 asparagine synthase B 0.20 EX31_RS23935 ABC transporter substrate-binding protein low > 89
Escherichia coli BL21 0.13 ECD_00631 asparagine synthetase B 0.22 ECD_02061 putative ABC transporter periplasmic binding protein low > 60
Escherichia coli Nissle 1917 0.13 ECOLIN_RS03600 asparagine synthase B 0.21 ECOLIN_RS25495 glycine betaine ABC transporter substrate-binding protein OsmF — —
Escherichia coli ECRC99 0.13 KEDOAH_20790 asnB asparagine synthase B 0.22 KEDOAH_04525 osmF glycine betaine ABC transporter substrate-binding protein OsmF — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.13 OHPLBJKB_03042 Asparagine synthetase B [glutamine-hydrolyzing] 0.21 OHPLBJKB_01579 Glycine betaine-binding protein YehZ low > 73
Escherichia fergusonii Becca 0.13 EFB2_03429 Asparagine synthetase B [glutamine-hydrolyzing] 0.22 EFB2_01724 Glycine betaine-binding protein YehZ low > 86
Escherichia coli ECRC101 0.13 OKFHMN_07180 asnB asparagine synthase B 0.22 OKFHMN_23660 osmF glycine betaine ABC transporter substrate-binding protein OsmF — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.13 GFF4582 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) 0.39 GFF1780 Putative ABC transporter periplasmic binding protein low > 78
Escherichia coli ECRC98 0.13 JDDGAC_10830 asnB asparagine synthase B 0.22 JDDGAC_27615 osmF glycine betaine ABC transporter substrate-binding protein OsmF — —
Escherichia coli ECRC101 0.13 MCAODC_26395 asnB asparagine synthase B 0.22 MCAODC_14710 osmF glycine betaine ABC transporter substrate-binding protein OsmF — —
Escherichia coli BW25113 0.13 b0674 asnB asparagine synthetase B (NCBI) 0.22 b2131 yehZ predicted transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) low > 76
Escherichia coli ECOR38 0.13 HEPCGN_01050 asnB asparagine synthase B 0.22 HEPCGN_02235 osmF glycine betaine ABC transporter substrate-binding protein OsmF low > 85
Escherichia coli ECRC102 0.13 NIAGMN_05235 asnB asparagine synthase B 0.22 NIAGMN_21425 osmF glycine betaine ABC transporter substrate-binding protein OsmF — —
Escherichia coli ECRC62 0.13 BNILDI_21565 asnB asparagine synthase B 0.22 BNILDI_14150 osmF glycine betaine ABC transporter substrate-binding protein OsmF — —
Escherichia coli ECOR27 0.13 NOLOHH_23560 asnB asparagine synthase B 0.22 NOLOHH_15200 osmF glycine betaine ABC transporter substrate-binding protein OsmF low > 57

Not shown: 23 genomes with orthologs for PS417_19230 only; 10 genomes with orthologs for PS417_04020 only