Conservation of cofitness between GFF122 and GFF635 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF122 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 1.0 GFF635 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) 0.87 6
Escherichia coli Nissle 1917 0.97 ECOLIN_RS00640 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.98 ECOLIN_RS19335 tryptophan--tRNA ligase
Escherichia coli ECRC99 0.97 KEDOAH_17655 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.98 KEDOAH_11000 trpS tryptophan--tRNA ligase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.97 OHPLBJKB_03547 Pyruvate dehydrogenase E1 component 0.97 OHPLBJKB_00319 Tryptophan--tRNA ligase
Escherichia coli ECRC102 0.97 NIAGMN_08350 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.98 NIAGMN_14910 trpS tryptophan--tRNA ligase
Escherichia coli ECRC62 0.97 BNILDI_08765 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.97 BNILDI_02590 gph phosphoglycolate phosphatase
Escherichia coli ECRC101 0.97 OKFHMN_10500 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.98 OKFHMN_17140 trpS tryptophan--tRNA ligase
Escherichia coli BW25113 0.97 b0114 aceE pyruvate dehydrogenase subunit E1 (NCBI) 0.97 b3384 trpS tryptophanyl-tRNA synthetase (NCBI)
Escherichia coli ECOR27 0.97 NOLOHH_02845 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.97 NOLOHH_08930 gph phosphoglycolate phosphatase
Escherichia coli ECRC101 0.97 MCAODC_01015 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.98 MCAODC_07670 trpS tryptophan--tRNA ligase
Escherichia coli ECRC98 0.97 JDDGAC_14095 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.98 JDDGAC_20770 trpS tryptophan--tRNA ligase
Escherichia coli BL21 0.97 ECD_00113 pyruvate dehydrogenase, decarboxylase component E1, thiamine triphosphate-binding 0.97 ECD_03236 tryptophanyl-tRNA synthetase
Escherichia fergusonii Becca 0.97 EFB2_03931 Pyruvate dehydrogenase E1 component 0.98 EFB2_00444 Tryptophan--tRNA ligase
Escherichia coli ECOR38 0.97 HEPCGN_08480 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.98 HEPCGN_15960 trpS tryptophan--tRNA ligase
Enterobacter asburiae PDN3 0.97 EX28DRAFT_3710 pyruvate dehydrogenase E1 component, homodimeric type 0.95 EX28DRAFT_4158 tryptophanyl-tRNA synthetase (EC 6.1.1.2) low > 76
Klebsiella michiganensis M5al 0.96 BWI76_RS04880 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.95 BWI76_RS26060 tryptophan--tRNA ligase
Enterobacter sp. TBS_079 0.96 MPMX20_00807 Pyruvate dehydrogenase E1 component 0.95 MPMX20_04273 Tryptophan--tRNA ligase low > 85
Pectobacterium carotovorum WPP14 0.93 HER17_RS03290 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.90 HER17_RS01805 tryptophan--tRNA ligase
Erwinia tracheiphila SCR3 0.92 LU632_RS03080 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.89 LU632_RS22840 trpS tryptophan--tRNA ligase
Dickeya dadantii 3937 0.92 DDA3937_RS17925 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.91 DDA3937_RS19520 tryptophan--tRNA ligase
Dickeya dianthicola ME23 0.92 DZA65_RS19000 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.91 DZA65_RS20735 tryptophan--tRNA ligase
Dickeya dianthicola 67-19 0.92 HGI48_RS17850 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.91 HGI48_RS19650 tryptophan--tRNA ligase
Pantoea sp. MT58 0.92 IAI47_15810 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.89 IAI47_01920 tryptophan--tRNA ligase
Rahnella sp. WP5 0.92 EX31_RS03480 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.86 EX31_RS04695 tryptophan--tRNA ligase
Serratia liquefaciens MT49 0.91 IAI46_21325 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.88 IAI46_23675 tryptophan--tRNA ligase low > 86
Vibrio cholerae E7946 ATCC 55056 0.73 CSW01_12220 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.69 CSW01_13275 tryptophan--tRNA ligase
Shewanella amazonensis SB2B 0.73 Sama_0375 aceE pyruvate dehydrogenase subunit E1 (RefSeq) 0.73 Sama_3360 tryptophanyl-tRNA synthetase (RefSeq)
Shewanella loihica PV-4 0.69 Shew_3431 aceE pyruvate dehydrogenase subunit E1 (RefSeq) 0.75 Shew_0221 tryptophanyl-tRNA synthetase (RefSeq)
Shewanella sp. ANA-3 0.69 Shewana3_0426 aceE pyruvate dehydrogenase subunit E1 (RefSeq) 0.75 Shewana3_3886 tryptophanyl-tRNA synthetase (RefSeq)
Shewanella oneidensis MR-1 0.69 SO0424 aceE pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase (NCBI ptt file) 0.76 SO0294 trpS tryptophanyl-tRNA synthetase (NCBI ptt file)
Alteromonas macleodii MIT1002 0.66 MIT1002_03003 Pyruvate dehydrogenase E1 component 0.69 MIT1002_00440 Tryptophan--tRNA ligase
Dinoroseobacter shibae DFL-12 0.61 Dshi_1968 2-oxo-acid dehydrogenase E1 subunit, homodimeric type (RefSeq) 0.41 Dshi_2836 tryptophanyl-tRNA synthetase (RefSeq)
Mycobacterium tuberculosis H37Rv 0.49 Rv2241 Pyruvate dehydrogenase E1 component AceE (pyruvate decarboxylase) (pyruvate dehydrogenase) (pyruvic dehydrogenase) 0.48 Rv3336c Probable tryptophanyl-tRNA synthetase TrpS (tryptophan--tRNA ligase) (TRPRS) (tryptophan translase)
Bosea sp. OAE506 0.07 ABIE41_RS08425 transketolase 0.42 ABIE41_RS04465 tryptophan--tRNA ligase
Caulobacter crescentus NA1000 Δfur 0.07 CCNA_01263 pyruvate dehydrogenase E1 component 0.39 CCNA_00062 tryptophanyl-tRNA synthetase
Caulobacter crescentus NA1000 0.07 CCNA_01263 pyruvate dehydrogenase E1 component 0.39 CCNA_00062 tryptophanyl-tRNA synthetase
Phaeobacter inhibens DSM 17395 0.07 PGA1_c16590 transketolase-like protein 0.41 PGA1_c26770 tryptophanyl-tRNA synthetase TrpS
Azospirillum sp. SherDot2 0.07 MPMX19_03172 Pyruvate dehydrogenase E1 component 0.41 MPMX19_02477 Tryptophan--tRNA ligase

Not shown: 39 genomes with orthologs for GFF122 only; 16 genomes with orthologs for GFF635 only