Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 1.0 | GFF122 | | Pyruvate dehydrogenase E1 component (EC 1.2.4.1) | 1.0 | GFF635 | | Tryptophanyl-tRNA synthetase (EC 6.1.1.2) | 0.87 | 6 |
Escherichia coli Nissle 1917 | 0.97 | ECOLIN_RS00640 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.98 | ECOLIN_RS19335 | | tryptophan--tRNA ligase | — | — |
Escherichia coli ECRC99 | 0.97 | KEDOAH_17655 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.98 | KEDOAH_11000 | trpS | tryptophan--tRNA ligase | — | — |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.97 | OHPLBJKB_03547 | | Pyruvate dehydrogenase E1 component | 0.97 | OHPLBJKB_00319 | | Tryptophan--tRNA ligase | — | — |
Escherichia coli ECRC102 | 0.97 | NIAGMN_08350 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.98 | NIAGMN_14910 | trpS | tryptophan--tRNA ligase | — | — |
Escherichia coli ECRC62 | 0.97 | BNILDI_08765 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.97 | BNILDI_02590 | gph | phosphoglycolate phosphatase | — | — |
Escherichia coli ECRC101 | 0.97 | OKFHMN_10500 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.98 | OKFHMN_17140 | trpS | tryptophan--tRNA ligase | — | — |
Escherichia coli BW25113 | 0.97 | b0114 | aceE | pyruvate dehydrogenase subunit E1 (NCBI) | 0.97 | b3384 | trpS | tryptophanyl-tRNA synthetase (NCBI) | — | — |
Escherichia coli ECOR27 | 0.97 | NOLOHH_02845 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.97 | NOLOHH_08930 | gph | phosphoglycolate phosphatase | — | — |
Escherichia coli ECRC101 | 0.97 | MCAODC_01015 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.98 | MCAODC_07670 | trpS | tryptophan--tRNA ligase | — | — |
Escherichia coli ECRC98 | 0.97 | JDDGAC_14095 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.98 | JDDGAC_20770 | trpS | tryptophan--tRNA ligase | — | — |
Escherichia coli BL21 | 0.97 | ECD_00113 | | pyruvate dehydrogenase, decarboxylase component E1, thiamine triphosphate-binding | 0.97 | ECD_03236 | | tryptophanyl-tRNA synthetase | — | — |
Escherichia fergusonii Becca | 0.97 | EFB2_03931 | | Pyruvate dehydrogenase E1 component | 0.98 | EFB2_00444 | | Tryptophan--tRNA ligase | — | — |
Escherichia coli ECOR38 | 0.97 | HEPCGN_08480 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.98 | HEPCGN_15960 | trpS | tryptophan--tRNA ligase | — | — |
Enterobacter asburiae PDN3 | 0.97 | EX28DRAFT_3710 | | pyruvate dehydrogenase E1 component, homodimeric type | 0.95 | EX28DRAFT_4158 | | tryptophanyl-tRNA synthetase (EC 6.1.1.2) | low | > 76 |
Klebsiella michiganensis M5al | 0.96 | BWI76_RS04880 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.95 | BWI76_RS26060 | | tryptophan--tRNA ligase | — | — |
Enterobacter sp. TBS_079 | 0.96 | MPMX20_00807 | | Pyruvate dehydrogenase E1 component | 0.95 | MPMX20_04273 | | Tryptophan--tRNA ligase | low | > 85 |
Pectobacterium carotovorum WPP14 | 0.93 | HER17_RS03290 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.90 | HER17_RS01805 | | tryptophan--tRNA ligase | — | — |
Erwinia tracheiphila SCR3 | 0.92 | LU632_RS03080 | aceE | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.89 | LU632_RS22840 | trpS | tryptophan--tRNA ligase | — | — |
Dickeya dadantii 3937 | 0.92 | DDA3937_RS17925 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.91 | DDA3937_RS19520 | | tryptophan--tRNA ligase | — | — |
Dickeya dianthicola ME23 | 0.92 | DZA65_RS19000 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.91 | DZA65_RS20735 | | tryptophan--tRNA ligase | — | — |
Dickeya dianthicola 67-19 | 0.92 | HGI48_RS17850 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.91 | HGI48_RS19650 | | tryptophan--tRNA ligase | — | — |
Pantoea sp. MT58 | 0.92 | IAI47_15810 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.89 | IAI47_01920 | | tryptophan--tRNA ligase | — | — |
Rahnella sp. WP5 | 0.92 | EX31_RS03480 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.86 | EX31_RS04695 | | tryptophan--tRNA ligase | — | — |
Serratia liquefaciens MT49 | 0.91 | IAI46_21325 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.88 | IAI46_23675 | | tryptophan--tRNA ligase | low | > 86 |
Vibrio cholerae E7946 ATCC 55056 | 0.73 | CSW01_12220 | | pyruvate dehydrogenase (acetyl-transferring), homodimeric type | 0.69 | CSW01_13275 | | tryptophan--tRNA ligase | — | — |
Shewanella amazonensis SB2B | 0.73 | Sama_0375 | aceE | pyruvate dehydrogenase subunit E1 (RefSeq) | 0.73 | Sama_3360 | | tryptophanyl-tRNA synthetase (RefSeq) | — | — |
Shewanella loihica PV-4 | 0.69 | Shew_3431 | aceE | pyruvate dehydrogenase subunit E1 (RefSeq) | 0.75 | Shew_0221 | | tryptophanyl-tRNA synthetase (RefSeq) | — | — |
Shewanella sp. ANA-3 | 0.69 | Shewana3_0426 | aceE | pyruvate dehydrogenase subunit E1 (RefSeq) | 0.75 | Shewana3_3886 | | tryptophanyl-tRNA synthetase (RefSeq) | — | — |
Shewanella oneidensis MR-1 | 0.69 | SO0424 | aceE | pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase (NCBI ptt file) | 0.76 | SO0294 | trpS | tryptophanyl-tRNA synthetase (NCBI ptt file) | — | — |
Alteromonas macleodii MIT1002 | 0.66 | MIT1002_03003 | | Pyruvate dehydrogenase E1 component | 0.69 | MIT1002_00440 | | Tryptophan--tRNA ligase | — | — |
Dinoroseobacter shibae DFL-12 | 0.61 | Dshi_1968 | | 2-oxo-acid dehydrogenase E1 subunit, homodimeric type (RefSeq) | 0.41 | Dshi_2836 | | tryptophanyl-tRNA synthetase (RefSeq) | — | — |
Mycobacterium tuberculosis H37Rv | 0.49 | Rv2241 | | Pyruvate dehydrogenase E1 component AceE (pyruvate decarboxylase) (pyruvate dehydrogenase) (pyruvic dehydrogenase) | 0.48 | Rv3336c | | Probable tryptophanyl-tRNA synthetase TrpS (tryptophan--tRNA ligase) (TRPRS) (tryptophan translase) | — | — |
Bosea sp. OAE506 | 0.07 | ABIE41_RS08425 | | transketolase | 0.42 | ABIE41_RS04465 | | tryptophan--tRNA ligase | — | — |
Caulobacter crescentus NA1000 Δfur | 0.07 | CCNA_01263 | | pyruvate dehydrogenase E1 component | 0.39 | CCNA_00062 | | tryptophanyl-tRNA synthetase | — | — |
Caulobacter crescentus NA1000 | 0.07 | CCNA_01263 | | pyruvate dehydrogenase E1 component | 0.39 | CCNA_00062 | | tryptophanyl-tRNA synthetase | — | — |
Phaeobacter inhibens DSM 17395 | 0.07 | PGA1_c16590 | | transketolase-like protein | 0.41 | PGA1_c26770 | | tryptophanyl-tRNA synthetase TrpS | — | — |
Azospirillum sp. SherDot2 | 0.07 | MPMX19_03172 | | Pyruvate dehydrogenase E1 component | 0.41 | MPMX19_02477 | | Tryptophan--tRNA ligase | — | — |
Not shown: 39 genomes with orthologs for GFF122 only; 16 genomes with orthologs for GFF635 only