Conservation of cofitness between GFF4080 and GFF4977 in Sphingobium sp. HT1-2

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF4080 Bis-ABC ATPase Uup 1.0 GFF4977 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.79) 0.73 6
Sphingomonas koreensis DSMZ 15582 0.72 Ga0059261_1367 ATPase components of ABC transporters with duplicated ATPase domains 0.34 Ga0059261_1006 NAD-dependent aldehyde dehydrogenases low > 68
Rhodospirillum rubrum S1H 0.48 Rru_A1013 ABC transporter component (NCBI) 0.40 Rru_A0462 Aldehyde dehydrogenase (NCBI) low > 58
Xanthobacter sp. DMC5 0.42 GFF1685 ABC transporter ATP-binding protein uup 0.38 GFF2872 Succinate semialdehyde dehydrogenase [NAD(P)+] Sad — —
Phaeobacter inhibens DSM 17395 0.42 PGA1_c11290 putative holdfast attachment protein C 0.60 PGA1_262p00540 succinate-semialdehyde dehdyrogenase GabD low > 62
Brevundimonas sp. GW460-12-10-14-LB2 0.38 A4249_RS10210 ABC-F family ATP-binding cassette domain-containing protein 0.40 A4249_RS12765 NAD-dependent succinate-semialdehyde dehydrogenase low > 48
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS11545 ATP-binding cassette domain-containing protein 0.37 ABZR86_RS04460 NAD-dependent succinate-semialdehyde dehydrogenase low > 74
Rahnella sp. WP5 0.34 EX31_RS18075 ABC transporter ATP-binding protein 0.38 EX31_RS23855 NAD-dependent succinate-semialdehyde dehydrogenase low > 89
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS24715 ATP-binding cassette domain-containing protein 0.40 QEN71_RS38495 NAD-dependent succinate-semialdehyde dehydrogenase low > 153
Xanthomonas campestris pv. campestris strain 8004 0.34 Xcc-8004.2276.1 COG0488: ATPase components of ABC transporters with duplicated ATPase domains 0.39 Xcc-8004.2214.1 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) low > 74
Variovorax sp. OAS795 0.34 ABID97_RS00005 ATP-binding cassette domain-containing protein 0.38 ABID97_RS19050 NAD-dependent succinate-semialdehyde dehydrogenase low > 91
Variovorax sp. SCN45 0.33 GFF3812 Bis-ABC ATPase Uup 0.34 GFF713 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.79) low > 127
Enterobacter asburiae PDN3 0.33 EX28DRAFT_1994 ATPase components of ABC transporters with duplicated ATPase domains 0.40 EX28DRAFT_3530 NAD-dependent aldehyde dehydrogenases low > 76
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_3899 COG0488: ATPase components of ABC transporters with duplicated ATPase domains 0.37 Pf1N1B4_5616 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) low > 87
Pseudomonas sp. BP01 0.33 JOY50_RS25020 ATP-binding cassette domain-containing protein 0.38 JOY50_RS21630 aldehyde dehydrogenase family protein low > 84
Escherichia coli ECOR38 0.33 HEPCGN_23245 uup ABC transporter ATP-binding protein 0.39 HEPCGN_26650 sad succinate-semialdehyde dehydrogenase low > 88
Pseudomonas putida KT2440 0.33 PP_2131 DNA-binding ATPase involved in replication 0.39 PP_2488 NAD+-dependent succinate semialdehyde dehydrogenase low > 96
Klebsiella michiganensis M5al 0.33 BWI76_RS09930 ABC transporter ATPase 0.40 BWI76_RS03795 putative aldehyde dehydrogenase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF3240 COG0488: ATPase components of ABC transporters with duplicated ATPase domains 0.39 GFF2511 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) low > 78
Escherichia coli Nissle 1917 0.32 ECOLIN_RS04985 ABC transporter ATP-binding protein 0.39 ECOLIN_RS08710 succinate-semialdehyde dehydrogenase — —
Escherichia fergusonii Becca 0.32 EFB2_03122 ABC transporter ATP-binding protein uup 0.39 EFB2_02435 Succinate semialdehyde dehydrogenase [NAD(P)+] Sad low > 86
Escherichia coli ECRC101 0.32 MCAODC_24665 uup ABC transporter ATP-binding protein 0.38 MCAODC_16815 sad succinate-semialdehyde dehydrogenase low > 88
Escherichia coli ECRC98 0.32 JDDGAC_08885 uup ABC transporter ATP-binding protein 0.38 JDDGAC_03620 sad succinate-semialdehyde dehydrogenase low > 87
Escherichia coli ECRC100 0.32 OKFHMN_05275 uup ABC transporter ATP-binding protein 0.38 OKFHMN_01110 sad succinate-semialdehyde dehydrogenase low > 79
Escherichia coli ECRC99 0.32 KEDOAH_22460 uup ABC transporter ATP-binding protein 0.39 KEDOAH_27320 sad succinate-semialdehyde dehydrogenase — —
Escherichia coli ECRC102 0.32 NIAGMN_02995 uup ABC transporter ATP-binding protein 0.38 NIAGMN_25255 sad succinate-semialdehyde dehydrogenase low > 80
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_3294 ABC transporter 0.36 Psyr_2394 succinate semialdehyde dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_3294 ABC transporter 0.36 Psyr_2394 succinate semialdehyde dehydrogenase low > 86
Pseudomonas sp. SVBP6 0.32 COO64_RS09375 ATP-binding cassette domain-containing protein 0.36 COO64_RS20795 aldehyde dehydrogenase family protein low > 93
Klebsiella pneumoniae MKP103 0.32 KDGMDA_18165 ABC transporter ATP-binding protein 0.41 KDGMDA_12040 succinate-semialdehyde dehydrogenase low > 95
Enterobacter sp. TBS_079 0.32 MPMX20_01600 ABC transporter ATP-binding protein uup 0.40 MPMX20_00625 Succinate-semialdehyde dehydrogenase [NADP(+)] 1 low > 85
Erwinia amylovora T8 0.32 OLJFJH_15970 ABC transporter ATP-binding protein 0.40 OLJFJH_15845 succinate-semialdehyde dehydrogenase low > 58
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_4044 COG0488: ATPase components of ABC transporters with duplicated ATPase domains 0.39 PfGW456L13_3880 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) low > 87
Pseudomonas lactucae CFBP13502 0.32 GEMAOFIL_01644 ABC transporter ATP-binding protein uup 0.37 GEMAOFIL_03968 Succinate semialdehyde dehydrogenase [NAD(P)+] Sad low > 93
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_02717 ABC transporter ATP-binding protein uup 0.39 OHPLBJKB_02194 Succinate semialdehyde dehydrogenase [NAD(P)+] Sad low > 74
Escherichia coli ECOR27 0.32 NOLOHH_21830 uup ABC transporter ATP-binding protein 0.39 NOLOHH_18760 sad succinate-semialdehyde dehydrogenase low > 76
Escherichia coli BL21 0.32 ECD_00953 replication regulatory ABC-F family DNA-binding ATPase 0.39 ECD_01482 succinate semialdehyde dehydrogenase, NAD(P)+-dependent low > 61
Escherichia coli ECRC62 0.32 BNILDI_19995 uup ABC transporter ATP-binding protein 0.39 BNILDI_17240 sad succinate-semialdehyde dehydrogenase low > 75
Escherichia coli BW25113 0.32 b0949 uup fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) 0.39 b1525 b1525 putative aldehyde dehydrogenase (VIMSS) low > 76
Pseudomonas fluorescens SBW25 0.31 PFLU_RS07635 ATP-binding cassette domain-containing protein 0.39 PFLU_RS20675 aldehyde dehydrogenase family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS07635 ATP-binding cassette domain-containing protein 0.39 PFLU_RS20675 aldehyde dehydrogenase family protein low > 109
Erwinia tracheiphila SCR3 0.31 LU632_RS09970 ABC transporter ATP-binding protein 0.40 LU632_RS10125 NAD-dependent succinate-semialdehyde dehydrogenase low > 74
Pseudomonas simiae WCS417 0.31 PS417_07555 ABC transporter ATPase 0.39 PS417_18705 succinate dehydrogenase low > 88
Pseudomonas sp. DMC3 0.31 GFF1268 ABC transporter ATP-binding protein uup 0.39 GFF1764 Succinate semialdehyde dehydrogenase [NAD(P)+] Sad low > 89
Pantoea sp. MT58 0.31 IAI47_12685 ABC transporter ATP-binding protein 0.39 IAI47_12560 NAD-dependent succinate-semialdehyde dehydrogenase low > 76
Pantoea agglomerans CFBP13505 P0401 0.31 PagCFBP13505_RS04645 ABC transporter ATP-binding protein 0.38 PagCFBP13505_RS04770 NAD-dependent succinate-semialdehyde dehydrogenase low > 74

Not shown: 45 genomes with orthologs for GFF4080 only; 11 genomes with orthologs for GFF4977 only