Conservation of cofitness between PS417_12920 and PS417_23950 in Pseudomonas simiae WCS417

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_12920 endoribonuclease 1.0 PS417_23950 polynucleotide phosphorylase/polyadenylase 0.50 10
Pseudomonas fluorescens SBW25-INTG 0.87 PFLU_RS13590 RidA family protein 0.99 PFLU_RS25790 polyribonucleotide nucleotidyltransferase low > 109
Pseudomonas fluorescens SBW25 0.87 PFLU_RS13590 RidA family protein 0.99 PFLU_RS25790 polyribonucleotide nucleotidyltransferase low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_3399 Endoribonuclease L-PSP 0.96 Psyr_4176 Polyribonucleotide nucleotidyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_3399 Endoribonuclease L-PSP 0.96 Psyr_4176 Polyribonucleotide nucleotidyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_353 Bona fide RidA/YjgF/TdcF/RutC subgroup 0.98 Pf6N2E2_3349 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) low > 103
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_26795 reactive intermediate/imine deaminase 0.98 AO356_07390 polyribonucleotide nucleotidyltransferase low > 104
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_4209 Translation initiation inhibitor 0.97 Pf1N1B4_1156 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) — —
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS16635 RidA family protein 0.59 RALBFv3_RS03005 polyribonucleotide nucleotidyltransferase low > 76
Ralstonia solanacearum UW163 0.48 UW163_RS17990 RidA family protein 0.59 UW163_RS10720 polyribonucleotide nucleotidyltransferase — —
Ralstonia solanacearum PSI07 0.47 RPSI07_RS06815 RidA family protein 0.59 RPSI07_RS14305 polyribonucleotide nucleotidyltransferase low > 81
Paraburkholderia graminis OAS925 0.46 ABIE53_003968 2-iminobutanoate/2-iminopropanoate deaminase 0.60 ABIE53_001586 polyribonucleotide nucleotidyltransferase low > 113
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS19585 RidA family protein 0.59 QEN71_RS24175 polyribonucleotide nucleotidyltransferase — —
Ralstonia solanacearum GMI1000 0.45 RS_RS24425 RidA family protein 0.59 RS_RS10375 polyribonucleotide nucleotidyltransferase low > 80
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS17675 RidA family protein 0.58 ABZR87_RS14910 polyribonucleotide nucleotidyltransferase low > 80
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS15355 endoribonuclease L-PSP 0.59 BPHYT_RS06600 polynucleotide phosphorylase/polyadenylase low > 109
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS33455 endoribonuclease L-PSP 0.59 RR42_RS05485 polynucleotide phosphorylase/polyadenylase low > 128
Variovorax sp. OAS795 0.39 ABID97_RS21535 RidA family protein 0.59 ABID97_RS20520 polyribonucleotide nucleotidyltransferase — —
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS05705 endoribonuclease L-PSP 0.59 HSERO_RS08755 polynucleotide phosphorylase/polyadenylase — —
Paraburkholderia bryophila 376MFSha3.1 0.38 H281DRAFT_06511 reactive intermediate/imine deaminase 0.59 H281DRAFT_04562 polyribonucleotide nucleotidyltransferase low > 103
Sinorhizobium meliloti 1021 0.25 SM_b21123 translation initiation inhibitor 0.54 SMc00324 polynucleotide phosphorylase/polyadenylase — —

Not shown: 0 genomes with orthologs for PS417_12920 only; 80 genomes with orthologs for PS417_23950 only