Conservation of cofitness between PS417_16555 and PS417_23390 in Pseudomonas simiae WCS417

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_16555 cupin 1.0 PS417_23390 ubiquinol oxidase subunit II 0.29 16
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS18595 cupin domain-containing protein 0.99 PFLU_RS25220 ubiquinol oxidase subunit II low > 109
Pseudomonas fluorescens SBW25 0.98 PFLU_RS18595 cupin domain-containing protein 0.99 PFLU_RS25220 ubiquinol oxidase subunit II low > 109
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_27720 cupin 0.73 AO353_15450 ubiquinol oxidase subunit II 0.40 55
Pseudomonas sp. RS175 0.91 PFR28_02622 50S ribosomal protein L16 3-hydroxylase 0.72 PFR28_00242 Cytochrome bo(3) ubiquinol oxidase subunit 2 — —
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_283 FIG002776: hypothetical protein 0.71 Pf6N2E2_5317 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) — —
Pseudomonas fluorescens FW300-N2C3 0.89 AO356_22095 cupin 0.72 AO356_16960 ubiquinol oxidase subunit II low > 104
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_4045 FIG002776: hypothetical protein 0.70 Pf1N1B4_973 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) — —
Pseudomonas fluorescens GW456-L13 0.89 PfGW456L13_2636 FIG002776: hypothetical protein 0.73 PfGW456L13_4936 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) low > 87
Pseudomonas syringae pv. syringae B728a 0.88 Psyr_3193 Transcription factor jumonji, jmjC 0.70 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.88 Psyr_3193 Transcription factor jumonji, jmjC 0.70 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 — —
Pseudomonas putida KT2440 0.84 PP_4017 conserved protein of unknown function 0.72 PP_0812 cytochrome bo terminal oxidase subunit II — —
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS05910 cupin domain-containing protein 0.47 ABZR86_RS07625 ubiquinol oxidase subunit II low > 74
Acinetobacter radioresistens SK82 0.34 MPMX26_01736 putative ribosomal oxygenase 0.43 MPMX26_01162 Cytochrome bo(3) ubiquinol oxidase subunit 2 low > 36
Acidovorax sp. GW101-3H11 0.32 Ac3H11_282 FIG074102: hypothetical protein 0.41 Ac3H11_3141 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) low > 79
Escherichia coli BW25113 0.31 b1128 ycfD orf, hypothetical protein (VIMSS) 0.54 b0432 cyoA cytochrome o ubiquinol oxidase subunit II (NCBI) low > 76
Escherichia coli ECRC62 0.31 BNILDI_19090 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.54 BNILDI_22710 cyoA cytochrome o ubiquinol oxidase subunit II — —
Escherichia coli ECOR27 0.31 NOLOHH_20925 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.54 NOLOHH_01295 cyoA cytochrome o ubiquinol oxidase subunit II low > 57
Escherichia coli ECOR38 0.31 HEPCGN_24085 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.54 HEPCGN_06975 cyoA cytochrome o ubiquinol oxidase subunit II low > 85
Escherichia fergusonii Becca 0.31 EFB2_02847 50S ribosomal protein L16 3-hydroxylase 0.54 EFB2_03625 Cytochrome bo(3) ubiquinol oxidase subunit 2 low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_02540 50S ribosomal protein L16 3-hydroxylase 0.54 OHPLBJKB_03241 Cytochrome bo(3) ubiquinol oxidase subunit 2 low > 73
Escherichia coli BL21 0.31 ECD_01126 50S ribosomal protein L16 arginine hydroxylase; 2-oxoglutarate oxygenase 0.54 ECD_00383 cytochrome o ubiquinol oxidase subunit II low > 60
Escherichia coli Nissle 1917 0.31 ECOLIN_RS06500 [50S ribosomal protein L16]-arginine 3-hydroxylase 0.54 ECOLIN_RS02595 cytochrome o ubiquinol oxidase subunit II — —
Escherichia coli ECRC102 0.31 NIAGMN_24760 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.54 NIAGMN_06415 cyoA cytochrome o ubiquinol oxidase subunit II — —
Escherichia coli ECRC99 0.31 KEDOAH_24720 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.54 KEDOAH_19605 cyoA cytochrome o ubiquinol oxidase subunit II — —
Escherichia coli ECRC101 0.31 MCAODC_22450 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.54 MCAODC_27585 cyoA cytochrome o ubiquinol oxidase subunit II — —
Escherichia coli ECRC98 0.31 JDDGAC_06730 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.54 JDDGAC_12015 cyoA cytochrome o ubiquinol oxidase subunit II — —
Escherichia coli ECRC101 0.31 OKFHMN_00635 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.54 OKFHMN_08360 cyoA cytochrome o ubiquinol oxidase subunit II — —
Cupriavidus basilensis FW507-4G11 0.31 RR42_RS06270 cupin 0.55 RR42_RS32600 cytochrome O ubiquinol oxidase subunit II 0.28 72
Enterobacter sp. TBS_079 0.30 MPMX20_01809 50S ribosomal protein L16 3-hydroxylase 0.53 MPMX20_01023 Cytochrome bo(3) ubiquinol oxidase subunit 2 low > 85
Klebsiella michiganensis M5al 0.30 BWI76_RS11270 50S ribosomal protein L16 arginine hydroxylase 0.53 BWI76_RS06495 cytochrome ubiquinol oxidase subunit II — —
Enterobacter asburiae PDN3 0.30 EX28DRAFT_1802 Uncharacterized conserved protein 0.53 EX28DRAFT_2539 cytochrome o ubiquinol oxidase subunit II low > 76
Dickeya dadantii 3937 0.30 DDA3937_RS11510 cupin domain-containing protein 0.56 DDA3937_RS05615 cytochrome o ubiquinol oxidase subunit II low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.30 GFF3413 FIG002776: hypothetical protein 0.53 GFF4346 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) low > 78
Dickeya dianthicola 67-19 0.30 HGI48_RS14985 cupin domain-containing protein 0.57 HGI48_RS05660 cytochrome o ubiquinol oxidase subunit II low > 71
Dickeya dianthicola ME23 0.29 DZA65_RS15735 cupin domain-containing protein 0.57 DZA65_RS05985 cytochrome o ubiquinol oxidase subunit II low > 75
Erwinia tracheiphila SCR3 0.29 LU632_RS14600 cupin domain-containing protein 0.57 LU632_RS18375 cyoA cytochrome o ubiquinol oxidase subunit II — —
Shewanella sp. ANA-3 0.29 Shewana3_1744 cupin 4 family protein (RefSeq) 0.49 Shewana3_4031 ubiquinol oxidase, subunit II (RefSeq) low > 73
Shewanella loihica PV-4 0.29 Shew_1557 cupin 4 family protein (RefSeq) 0.53 Shew_0366 ubiquinol oxidase, subunit II (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.26 MIT1002_01824 50S ribosomal protein L16 arginine hydroxylase 0.52 MIT1002_03929 Ubiquinol oxidase subunit 2 precursor low > 70

Not shown: 12 genomes with orthologs for PS417_16555 only; 16 genomes with orthologs for PS417_23390 only