Conservation of cofitness between GFF149 and GFF4515 in Hydrogenophaga sp. GW460-11-11-14-LB1

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF149 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 1.0 GFF4515 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 0.46 8
Variovorax sp. OAS795 0.77 ABID97_RS07235 phosphoglycerate dehydrogenase 0.81 ABID97_RS16920 NADP-dependent isocitrate dehydrogenase low > 91
Acidovorax sp. GW101-3H11 0.76 Ac3H11_4790 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.82 Ac3H11_2377 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) low > 79
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_08510 3-phosphoglycerate dehydrogenase 0.70 AO353_27690 isocitrate dehydrogenase low > 101
Pseudomonas fluorescens FW300-N2C3 0.75 AO356_10300 3-phosphoglycerate dehydrogenase 0.70 AO356_22135 isocitrate dehydrogenase low > 104
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS28695 phosphoglycerate dehydrogenase 0.71 PFLU_RS18565 NADP-dependent isocitrate dehydrogenase low > 109
Pseudomonas sp. RS175 0.75 PFR28_04842 D-3-phosphoglycerate dehydrogenase 0.70 PFR28_02616 Isocitrate dehydrogenase [NADP] low > 88
Pseudomonas fluorescens SBW25 0.75 PFLU_RS28695 phosphoglycerate dehydrogenase 0.71 PFLU_RS18565 NADP-dependent isocitrate dehydrogenase low > 109
Pseudomonas simiae WCS417 0.75 PS417_27040 3-phosphoglycerate dehydrogenase 0.70 PS417_16525 isocitrate dehydrogenase low > 88
Pseudomonas fluorescens FW300-N2E2 0.75 Pf6N2E2_3932 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.70 Pf6N2E2_289 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) low > 103
Pseudomonas fluorescens FW300-N1B4 0.74 Pf1N1B4_2272 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.70 Pf1N1B4_4052 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) low > 87
Pseudomonas sp. S08-1 0.74 OH686_11280 D-3-phosphoglycerate dehydrogenase 0.70 OH686_00220 isocitrate dehydrogenase, NADP-dependent — —
Pseudomonas fluorescens GW456-L13 0.74 PfGW456L13_943 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.70 PfGW456L13_2643 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) low > 87
Variovorax sp. SCN45 0.74 GFF2538 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.80 GFF343 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 0.49 87
Pseudomonas putida KT2440 0.73 PP_5155 D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase 0.70 PP_4011 isocitrate dehydrogenase, NADP(+)-specific low > 96
Pseudomonas stutzeri RCH2 0.73 Psest_3873 Phosphoglycerate dehydrogenase and related dehydrogenases 0.70 Psest_2024 isocitrate dehydrogenase, NADP-dependent, prokaryotic type — —
Acinetobacter radioresistens SK82 0.63 MPMX26_02773 D-3-phosphoglycerate dehydrogenase 0.68 MPMX26_01012 Isocitrate dehydrogenase [NADP] low > 36
Dickeya dianthicola 67-19 0.62 HGI48_RS18400 phosphoglycerate dehydrogenase 0.66 HGI48_RS11515 NADP-dependent isocitrate dehydrogenase — —
Dickeya dianthicola ME23 0.62 DZA65_RS19540 phosphoglycerate dehydrogenase 0.66 DZA65_RS11850 NADP-dependent isocitrate dehydrogenase — —
Dickeya dadantii 3937 0.62 DDA3937_RS18480 phosphoglycerate dehydrogenase 0.67 DDA3937_RS11470 NADP-dependent isocitrate dehydrogenase — —
Enterobacter sp. TBS_079 0.62 MPMX20_03771 D-3-phosphoglycerate dehydrogenase 0.65 MPMX20_01820 Isocitrate dehydrogenase [NADP] — —
Enterobacter asburiae PDN3 0.61 EX28DRAFT_2965 Phosphoglycerate dehydrogenase and related dehydrogenases 0.65 EX28DRAFT_1794 isocitrate dehydrogenase (NADP) (EC 1.1.1.42) — —
Erwinia tracheiphila SCR3 0.61 LU632_RS05855 serA phosphoglycerate dehydrogenase 0.64 LU632_RS14560 icd NADP-dependent isocitrate dehydrogenase — —
Klebsiella michiganensis M5al 0.61 BWI76_RS23920 D-3-phosphoglycerate dehydrogenase 0.65 BWI76_RS11330 isocitrate dehydrogenase (NADP(+)) — —
Pectobacterium carotovorum WPP14 0.61 HER17_RS02725 phosphoglycerate dehydrogenase 0.66 HER17_RS11610 NADP-dependent isocitrate dehydrogenase — —
Serratia liquefaciens MT49 0.61 IAI46_20900 phosphoglycerate dehydrogenase 0.66 IAI46_10460 NADP-dependent isocitrate dehydrogenase — —
Pantoea sp. MT58 0.60 IAI47_03725 phosphoglycerate dehydrogenase 0.65 IAI47_11900 NADP-dependent isocitrate dehydrogenase — —
Rahnella sp. WP5 0.60 EX31_RS21470 phosphoglycerate dehydrogenase 0.65 EX31_RS24590 NADP-dependent isocitrate dehydrogenase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.60 GFF3013 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.65 GFF3422 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) — —
Escherichia coli ECRC101 0.60 MCAODC_09980 serA phosphoglycerate dehydrogenase 0.66 MCAODC_22325 icd NADP-dependent isocitrate dehydrogenase — —
Escherichia coli ECRC101 0.60 OKFHMN_19460 serA phosphoglycerate dehydrogenase 0.66 OKFHMN_00760 icd NADP-dependent isocitrate dehydrogenase — —
Escherichia coli ECRC102 0.60 NIAGMN_17225 serA phosphoglycerate dehydrogenase 0.66 NIAGMN_24905 icd NADP-dependent isocitrate dehydrogenase — —
Escherichia coli ECOR38 0.60 HEPCGN_18760 serA phosphoglycerate dehydrogenase 0.66 HEPCGN_24245 icd NADP-dependent isocitrate dehydrogenase — —
Escherichia coli ECOR27 0.60 NOLOHH_11370 serA phosphoglycerate dehydrogenase 0.66 NOLOHH_20885 icd NADP-dependent isocitrate dehydrogenase — —
Escherichia coli ECRC98 0.60 JDDGAC_23100 serA phosphoglycerate dehydrogenase 0.66 JDDGAC_06605 icd NADP-dependent isocitrate dehydrogenase — —
Escherichia coli BL21 0.60 ECD_02744 D-3-phosphoglycerate dehydrogenase 0.66 ECD_01134 isocitrate dehydrogenase; e14 prophage attachment site; tellurite reductase — —
Escherichia coli Nissle 1917 0.60 ECOLIN_RS16210 phosphoglycerate dehydrogenase 0.66 ECOLIN_RS06640 NADP-dependent isocitrate dehydrogenase — —
Escherichia coli BW25113 0.60 b2913 serA D-3-phosphoglycerate dehydrogenase (NCBI) 0.66 b1136 icd isocitrate dehydrogenase (NCBI) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_00803 D-3-phosphoglycerate dehydrogenase 0.66 OHPLBJKB_02532 Isocitrate dehydrogenase [NADP] — —
Escherichia coli ECRC99 0.60 KEDOAH_08680 serA phosphoglycerate dehydrogenase 0.66 KEDOAH_24845 icd NADP-dependent isocitrate dehydrogenase — —
Escherichia coli ECRC62 0.59 BNILDI_09905 serA phosphoglycerate dehydrogenase 0.66 BNILDI_19050 icd NADP-dependent isocitrate dehydrogenase — —
Escherichia fergusonii Becca 0.59 EFB2_00990 D-3-phosphoglycerate dehydrogenase 0.66 EFB2_02839 Isocitrate dehydrogenase [NADP] — —
Castellaniella sp019104865 MT123 0.50 ABCV34_RS15150 phosphoglycerate dehydrogenase 0.80 ABCV34_RS07265 NADP-dependent isocitrate dehydrogenase — —
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS27010 D-3-phosphoglycerate dehydrogenase 0.79 RR42_RS17135 isocitrate dehydrogenase low > 128

Not shown: 22 genomes with orthologs for GFF149 only; 20 genomes with orthologs for GFF4515 only