| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas simiae WCS417 | 1.0 | PS417_04910 | | amino acid ABC transporter permease | 1.0 | PS417_19695 | | flagellar biosynthesis sigma factor | 0.37 | 15 |
| Pseudomonas fluorescens SBW25-INTG | 0.99 | PFLU_RS04970 | | amino acid ABC transporter permease | 0.99 | PFLU_RS21660 | | RNA polymerase sigma factor FliA | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.99 | PFLU_RS04970 | | amino acid ABC transporter permease | 0.99 | PFLU_RS21660 | | RNA polymerase sigma factor FliA | 0.56 | 14 |
| Pseudomonas fluorescens GW456-L13 | 0.93 | PfGW456L13_1700 | | Glutamate Aspartate transport system permease protein GltK (TC 3.A.1.3.4) | 0.97 | PfGW456L13_4331 | | RNA polymerase sigma factor for flagellar operon | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.92 | AO356_17390 | | amino acid ABC transporter permease | 0.96 | AO356_03730 | | flagellar biosynthesis sigma factor | low | > 104 |
| Pseudomonas sp. RS175 | 0.92 | PFR28_03540 | | Inner membrane amino-acid ABC transporter permease protein YhdY | 0.95 | PFR28_00852 | | RNA polymerase sigma factor FliA | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.92 | AO353_04605 | | amino acid ABC transporter permease | 0.97 | AO353_18785 | | flagellar biosynthesis sigma factor | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.92 | Pf6N2E2_5404 | | ABC transporter for D-Alanine, permease component 1 (from data) | 0.96 | Pf6N2E2_2573 | | RNA polymerase sigma factor for flagellar operon | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.92 | Pf1N1B4_915 | | Glutamate Aspartate transport system permease protein GltK (TC 3.A.1.3.4) | 0.97 | Pf1N1B4_3626 | | RNA polymerase sigma factor for flagellar operon | low | > 87 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.91 | Psyr_1074 | | amino acid ABC transporter membrane protein 2, PAAT family | 0.95 | Psyr_3437 | | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.91 | Psyr_1074 | | amino acid ABC transporter membrane protein 2, PAAT family | 0.95 | Psyr_3437 | | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG | low | > 86 |
| Pseudomonas putida KT2440 | 0.89 | PP_1299 | | putative amino acid ABC transporter - membrane subunit | 0.91 | PP_4341 | | RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons | low | > 96 |
| Pseudomonas sp. S08-1 | 0.84 | OH686_17815 | | Amino acid ABC transporter, permease protein 2, YhdY | 0.84 | OH686_02730 | | RNA polymerase sigma factor for flagellar operon | 0.54 | 57 |
| Pseudomonas stutzeri RCH2 | 0.78 | Psest_3161 | | amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family | 0.82 | Psest_1740 | | RNA polymerase sigma factor, FliA/WhiG family | low | > 67 |
| Escherichia coli ECOR27 | 0.68 | NOLOHH_09415 | yhdY | Inner membrane amino-acid ABC transporter permease protein YhdY | 0.42 | NOLOHH_16400 | fliA | RNA polymerase sigma factor FliA | low | > 57 |
| Escherichia coli ECRC62 | 0.68 | BNILDI_02105 | yhdY | Inner membrane amino-acid ABC transporter permease protein YhdY | 0.42 | BNILDI_15190 | fliA | RNA polymerase sigma factor FliA | — | — |
| Escherichia coli ECRC101 | 0.68 | MCAODC_08145 | yhdY | Inner membrane amino-acid ABC transporter permease protein YhdY | 0.42 | MCAODC_19610 | fliA | RNA polymerase sigma factor FliA | — | — |
| Escherichia coli ECRC101 | 0.68 | OKFHMN_17625 | yhdY | Inner membrane amino-acid ABC transporter permease protein YhdY | 0.42 | OKFHMN_25780 | fliA | RNA polymerase sigma factor FliA | — | — |
| Escherichia coli ECRC102 | 0.68 | NIAGMN_15385 | yhdY | Inner membrane amino-acid ABC transporter permease protein YhdY | 0.42 | NIAGMN_02270 | fliA | RNA polymerase sigma factor FliA | — | — |
| Escherichia coli ECRC99 | 0.68 | KEDOAH_10525 | yhdY | Inner membrane amino-acid ABC transporter permease protein YhdY | 0.42 | KEDOAH_02310 | fliA | RNA polymerase sigma factor FliA | — | — |
| Pantoea sp. MT58 | 0.67 | IAI47_02365 | | amino acid ABC transporter permease | 0.42 | IAI47_08160 | | RNA polymerase sigma factor FliA | low | > 76 |
| Escherichia coli ECOR38 | 0.67 | HEPCGN_16445 | yhdY | Inner membrane amino-acid ABC transporter permease protein YhdY | 0.42 | HEPCGN_04135 | fliA | RNA polymerase sigma factor FliA | low | > 85 |
| Escherichia coli BW25113 | 0.67 | b3270 | yhdY | putative transport system permease protein (VIMSS) | 0.42 | b1922 | fliA | flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons (VIMSS) | low | > 76 |
| Enterobacter asburiae PDN3 | 0.67 | EX28DRAFT_3323 | | amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family | 0.41 | EX28DRAFT_0625 | | RNA polymerase sigma factor, FliA/WhiG family | low | > 76 |
| Escherichia fergusonii Becca | 0.67 | EFB2_00553 | | Inner membrane amino-acid ABC transporter permease protein YhdY | 0.42 | EFB2_02023 | | RNA polymerase sigma factor FliA | low | > 86 |
| Rahnella sp. WP5 | 0.67 | EX31_RS12145 | | amino acid ABC transporter permease | 0.42 | EX31_RS09450 | | RNA polymerase sigma factor FliA | low | > 89 |
| Erwinia tracheiphila SCR3 | 0.66 | LU632_RS19780 | | amino acid ABC transporter permease | 0.43 | LU632_RS13785 | | RNA polymerase sigma factor FliA | low | > 74 |
| Dickeya dianthicola 67-19 | 0.65 | HGI48_RS01245 | | amino acid ABC transporter permease | 0.43 | HGI48_RS13350 | | RNA polymerase sigma factor FliA | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.65 | HER17_RS20300 | | amino acid ABC transporter permease | 0.41 | HER17_RS08355 | | RNA polymerase sigma factor FliA | low | > 75 |
| Dickeya dianthicola ME23 | 0.65 | DZA65_RS01290 | | amino acid ABC transporter permease | 0.43 | DZA65_RS13835 | | RNA polymerase sigma factor FliA | low | > 75 |
| Enterobacter sp. TBS_079 | 0.65 | MPMX20_04179 | | Inner membrane amino-acid ABC transporter permease protein YhdY | 0.41 | MPMX20_02847 | | RNA polymerase sigma factor FliA | low | > 85 |
| Dickeya dadantii 3937 | 0.64 | DDA3937_RS01260 | | amino acid ABC transporter permease | 0.43 | DDA3937_RS13300 | | RNA polymerase sigma factor FliA | low | > 74 |
| Escherichia coli Nissle 1917 | 0.64 | ECOLIN_RS18785 | | amino acid ABC transporter permease | 0.42 | ECOLIN_RS10975 | | RNA polymerase sigma factor FliA | low | > 52 |
| Marinobacter adhaerens HP15 | 0.62 | HP15_2194 | | amino acid ABC transporter, permease protein | 0.58 | HP15_2302 | | flagellar biosynthesis sigma factor FliA | low | > 73 |
| Vibrio cholerae E7946 ATCC 55056 | 0.61 | CSW01_06845 | | amino acid ABC transporter permease | 0.51 | CSW01_10335 | | RNA polymerase sigma factor FliA | low | > 62 |
| Variovorax sp. SCN45 | 0.44 | GFF4214 | | L-amino acid ABC transporter (Glu/Asp/His/...), permease protein 2 AapM | 0.39 | GFF5774 | | RNA polymerase sigma factor for flagellar operon | low | > 127 |
| Castellaniella sp019104865 MT123 | 0.18 | ABCV34_RS13095 | | amino acid ABC transporter permease | 0.36 | ABCV34_RS05605 | | RNA polymerase sigma factor FliA | low | > 48 |
Not shown: 12 genomes with orthologs for PS417_04910 only; 32 genomes with orthologs for PS417_19695 only