Conservation of cofitness between HP15_1931 and HP15_328 in Marinobacter adhaerens HP15

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_1931 2-methylcitrate synthase/citrate synthase II 1.0 HP15_328 two component, sigma54 specific, transcriptional regulator, Fis family 0.40 3
Pseudomonas fluorescens FW300-N2E2 0.77 Pf6N2E2_6062 2-methylcitrate synthase (EC 2.3.3.5) (from data) 0.61 Pf6N2E2_5156 Two-component sensor CbrB: intrcellular carbon:nitrogen balance low > 103
Pseudomonas sp. RS175 0.77 PFR28_02927 2-methylcitrate synthase 0.61 PFR28_03718 Transcriptional regulatory protein ZraR low > 88
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_20870 2-methylcitrate synthase 0.61 AO356_16075 Fis family transcriptional regulator low > 104
Pseudomonas fluorescens GW456-L13 0.76 PfGW456L13_4117 2-methylcitrate synthase (EC 2.3.3.5) 0.60 PfGW456L13_1524 Two-component sensor CbrB: intrcellular carbon:nitrogen balance low > 87
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_3820 2-methylcitrate synthase (EC 2.3.3.5) 0.61 Pf1N1B4_2858 Two-component sensor CbrB: intrcellular carbon:nitrogen balance low > 87
Pseudomonas simiae WCS417 0.75 PS417_21075 methylcitrate synthase 0.60 PS417_23895 Fis family transcriptional regulator — —
Pseudomonas putida KT2440 0.75 PP_2335 methylcitrate synthase 0.60 PP_4696 Nitrogen regulation protein NR(I) low > 96
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS22685 2-methylcitrate synthase 0.60 PFLU_RS25735 sigma-54-dependent Fis family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.75 PFLU_RS22685 2-methylcitrate synthase 0.60 PFLU_RS25735 sigma-54-dependent Fis family transcriptional regulator low > 109
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_00895 2-methylcitrate synthase 0.61 AO353_14400 Fis family transcriptional regulator low > 101
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_2086 2-methylcitrate synthase 0.60 Psyr_0831 Two-component response regulator CbrB low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_2086 2-methylcitrate synthase 0.60 Psyr_0831 Two-component response regulator CbrB — —
Pseudomonas stutzeri RCH2 0.74 Psest_2320 2-methylcitrate synthase/citrate synthase II 0.61 Psest_0999 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 0.14 61
Pseudomonas sp. S08-1 0.56 OH686_01685 2-methylcitrate synthase 0.61 OH686_17260 Two-component sensor CbrB: intrcellular carbon:nitrogen balance low > 80
Escherichia coli ECRC101 0.55 OKFHMN_08895 prpC 2-methylcitrate synthase 0.35 OKFHMN_13320 zraR sigma-54-dependent response regulator transcription factor ZraR — —
Escherichia coli ECRC102 0.55 NIAGMN_06950 prpC 2-methylcitrate synthase 0.35 NIAGMN_11070 zraR sigma-54-dependent response regulator transcription factor ZraR — —
Escherichia coli ECOR38 0.55 HEPCGN_07480 prpC 2-methylcitrate synthase 0.36 HEPCGN_11960 zraR sigma-54-dependent response regulator transcription factor ZraR low > 85
Escherichia coli ECRC98 0.55 JDDGAC_12550 prpC 2-methylcitrate synthase 0.34 JDDGAC_16945 zraR sigma-54-dependent response regulator transcription factor ZraR — —
Escherichia coli ECOR27 0.55 NOLOHH_01770 prpC 2-methylcitrate synthase 0.36 NOLOHH_05465 zraR sigma-54-dependent response regulator transcription factor ZraR low > 57
Escherichia coli ECRC99 0.55 KEDOAH_19070 prpC 2-methylcitrate synthase 0.35 KEDOAH_14840 zraR sigma-54-dependent response regulator transcription factor ZraR — —
Escherichia coli ECRC101 0.55 MCAODC_28125 prpC 2-methylcitrate synthase 0.35 MCAODC_03820 zraR sigma-54-dependent response regulator transcription factor ZraR — —
Escherichia coli BL21 0.55 ECD_00287 2-methylcitrate synthase 0.35 ECD_03881 fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein low > 60
Escherichia fergusonii Becca 0.55 EFB2_03705 2-methylcitrate synthase 0.36 EFB2_04606 Transcriptional regulatory protein ZraR low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_03338 2-methylcitrate synthase 0.36 OHPLBJKB_04045 Transcriptional regulatory protein ZraR low > 73
Escherichia coli Nissle 1917 0.55 ECOLIN_RS02155 2-methylcitrate synthase 0.36 ECOLIN_RS23090 sigma-54-dependent response regulator transcription factor ZraR low > 52
Azospirillum brasilense Sp245 0.55 AZOBR_RS24300 methylcitrate synthase 0.34 AZOBR_RS18445 chemotaxis protein CheY low > 97
Escherichia coli BW25113 0.55 b0333 prpC 2-methylcitrate synthase (NCBI) 0.35 b4004 zraR fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein (NCBI) low > 76
Phaeobacter inhibens DSM 17395 0.28 PGA1_c28860 citrate synthase GltA 0.25 PGA1_c27610 transcriptional regulatory protein, containing sigma-54 interaction domain low > 62
Bacteroides thetaiotaomicron VPI-5482 0.23 BT_2070 methylcitrate synthase (RefSeq) 0.32 BT3801 rteB, two-component system response regulator (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.23 BACOVA_03312 citrate (Si)-synthase 0.33 BACOVA_03647 Sigma-54 interaction domain protein low > 94
Parabacteroides merdae CL09T00C40 0.23 HMPREF1078_RS07505 citrate/2-methylcitrate synthase 0.32 HMPREF1078_RS07540 sigma-54 dependent transcriptional regulator low > 61
Phocaeicola dorei CL03T12C01 0.23 ABI39_RS09965 citrate/2-methylcitrate synthase 0.32 ABI39_RS02120 sigma-54-dependent Fis family transcriptional regulator low > 72
Phocaeicola vulgatus CL09T03C04 0.23 HMPREF1058_RS14335 citrate/2-methylcitrate synthase 0.32 HMPREF1058_RS02780 sigma-54-dependent Fis family transcriptional regulator low > 67

Not shown: 34 genomes with orthologs for HP15_1931 only; 6 genomes with orthologs for HP15_328 only