| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Marinobacter adhaerens HP15 | 1.0 | HP15_2442 | | RNA polymerase, sigma 54 subunit, RpoN | 1.0 | HP15_3208 | | ABC-type antimicrobial peptide transport system, permease component | 0.47 | 14 |
| Pseudomonas putida KT2440 | 0.63 | PP_0952 | | RNA polymerase sigma-54 factor | 0.45 | PP_0506 | | putative ABC efflux transporter, permease protein | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.63 | AO356_07035 | | RNA polymerase sigma-54 factor | 0.46 | AO356_14890 | | peptide ABC transporter permease | — | — |
| Pseudomonas sp. RS175 | 0.62 | PFR28_00173 | | RNA polymerase sigma-54 factor | 0.45 | PFR28_03957 | | hypothetical protein | — | — |
| Pseudomonas sp. S08-1 | 0.62 | OH686_08540 | | RNA polymerase sigma-54 factor | 0.45 | OH686_15645 | | ABC-type antimicrobial peptide transport system, permease component | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.62 | AO353_05180 | | RNA polymerase sigma-54 factor | 0.45 | AO353_06755 | | peptide ABC transporter permease | — | — |
| Pseudomonas fluorescens SBW25 | 0.62 | PFLU_RS04400 | | RNA polymerase factor sigma-54 | 0.44 | PFLU_RS26940 | | ABC transporter permease | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.62 | PfGW456L13_5014 | | RNA polymerase sigma-54 factor RpoN | 0.46 | PfGW456L13_1304 | | ABC-type antimicrobial peptide transport system, permease component | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.62 | PFLU_RS04400 | | RNA polymerase factor sigma-54 | 0.44 | PFLU_RS26940 | | ABC transporter permease | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.62 | Pf6N2E2_3267 | | RNA polymerase sigma-54 factor RpoN | 0.46 | Pf6N2E2_4911 | | ABC-type antimicrobial peptide transport system, permease component | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.61 | Psyr_4147 | | RNA polymerase, sigma 54 subunit, RpoN/SigL | 0.46 | Psyr_4471 | | Protein of unknown function DUF214 | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.61 | Psyr_4147 | | RNA polymerase, sigma 54 subunit, RpoN/SigL | 0.46 | Psyr_4471 | | Protein of unknown function DUF214 | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.61 | Pf1N1B4_1080 | | RNA polymerase sigma-54 factor RpoN | 0.45 | Pf1N1B4_2641 | | ABC-type antimicrobial peptide transport system, permease component | — | — |
| Pseudomonas stutzeri RCH2 | 0.61 | Psest_3313 | | RNA polymerase sigma-54 factor | 0.43 | Psest_3563 | | ABC-type transport system, involved in lipoprotein release, permease component | — | — |
| Pseudomonas simiae WCS417 | 0.61 | PS417_04345 | | RNA polymerase factor sigma-54 | 0.45 | PS417_25305 | | peptide ABC transporter permease | — | — |
| Alteromonas macleodii MIT1002 | 0.58 | MIT1002_00827 | | RNA polymerase sigma-54 factor 2 | 0.37 | MIT1002_03821 | | acidobacterial duplicated orphan permease | low | > 70 |
| Vibrio cholerae E7946 ATCC 55056 | 0.55 | CSW01_12815 | | RNA polymerase sigma-54 factor | 0.45 | CSW01_12935 | | ABC transporter permease | low | > 62 |
| Herbaspirillum seropedicae SmR1 | 0.39 | HSERO_RS19855 | | RNA polymerase subunit sigma-54 | 0.36 | HSERO_RS15895 | | peptide ABC transporter permease | — | — |
| Acidovorax sp. GW101-3H11 | 0.36 | Ac3H11_727 | | RNA polymerase sigma-54 factor RpoN | 0.13 | Ac3H11_2228 | | ABC-type antimicrobial peptide transport system, permease component | low | > 79 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.34 | GFF3068 | | RNA polymerase sigma-54 factor RpoN | 0.12 | GFF5746 | | ABC-type antimicrobial peptide transport system, permease component | low | > 90 |
| Variovorax sp. OAS795 | 0.34 | ABID97_RS04780 | | RNA polymerase factor sigma-54 | 0.41 | ABID97_RS09240 | | FtsX-like permease family protein | — | — |
| Variovorax sp. SCN45 | 0.33 | GFF6290 | | RNA polymerase sigma-54 factor RpoN | 0.41 | GFF6122 | | ABC-type antimicrobial peptide transport system, permease component | low | > 127 |
| Rhodospirillum rubrum S1H | 0.33 | Rru_A0010 | | Sigma-54 (RpoN) (NCBI) | 0.08 | Rru_A1292 | | Protein of unknown function DUF214 (NCBI) | low | > 58 |
| Rhizobium sp. OAE497 | 0.30 | ABIE40_RS01860 | | RNA polymerase factor sigma-54 | 0.08 | ABIE40_RS19070 | | ABC transporter permease | low | > 107 |
| Sphingomonas koreensis DSMZ 15582 | 0.28 | Ga0059261_2543 | | RNA polymerase, sigma 54 subunit, RpoN/SigL | 0.14 | Ga0059261_0495 | | ABC-type transport system, involved in lipoprotein release, permease component | low | > 68 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.27 | CA265_RS11005 | | RNA polymerase sigma-54 factor | 0.11 | CA265_RS02095 | | ABC transporter permease | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.26 | Echvi_0071 | | RNA polymerase sigma-54 factor | 0.15 | Echvi_2705 | | ABC-type transport system, involved in lipoprotein release, permease component | — | — |
Not shown: 69 genomes with orthologs for HP15_2442 only; 1 genomes with orthologs for HP15_3208 only