| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Marinobacter adhaerens HP15 | 1.0 | HP15_328 | | two component, sigma54 specific, transcriptional regulator, Fis family | 1.0 | HP15_3055 | | high-affinity leucine-specific leucine-specific-binding periplasmic protein of high-affinity branched-chain amino acid ABC transporter transport system periplasmic binding protein | 0.35 | 17 |
| Pseudomonas sp. S08-1 | 0.61 | OH686_17260 | | Two-component sensor CbrB: intrcellular carbon:nitrogen balance | 0.66 | OH686_04605 | | Branched-chain amino acid ABC transporter, substrate-binding protein LivJ | low | > 80 |
| Pseudomonas sp. RS175 | 0.61 | PFR28_03718 | | Transcriptional regulatory protein ZraR | 0.63 | PFR28_00540 | | Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.61 | AO356_16075 | | Fis family transcriptional regulator | 0.66 | AO356_05320 | | leucine ABC transporter substrate-binding protein | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.61 | Pf1N1B4_2858 | | Two-component sensor CbrB: intrcellular carbon:nitrogen balance | 0.67 | Pf1N1B4_3218 | | High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.61 | AO353_14400 | | Fis family transcriptional regulator | 0.66 | AO353_17125 | | leucine ABC transporter substrate-binding protein | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.61 | Pf6N2E2_5156 | | Two-component sensor CbrB: intrcellular carbon:nitrogen balance | 0.67 | Pf6N2E2_2921 | | ABC transporter for L-leucine/L-phenylalanine/D-alanine, substrate-binding component LivK (from data) | low | > 103 |
| Pseudomonas stutzeri RCH2 | 0.61 | Psest_0999 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | 0.66 | Psest_1312 | | ABC-type branched-chain amino acid transport systems, periplasmic component | low | > 67 |
| Pseudomonas putida KT2440 | 0.60 | PP_4696 | | Nitrogen regulation protein NR(I) | 0.63 | PP_1141 | | branched-chain amino acids ABC transporter - periplasmic leucine binding subunit | low | > 96 |
| Pseudomonas simiae WCS417 | 0.60 | PS417_23895 | | Fis family transcriptional regulator | 0.64 | PS417_06615 | | ABC transporter for branched-chain amino acids, substrate-binding component (from data) | — | — |
| Pseudomonas fluorescens SBW25 | 0.60 | PFLU_RS25735 | | sigma-54-dependent Fis family transcriptional regulator | 0.64 | PFLU_RS06645 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.60 | PFLU_RS25735 | | sigma-54-dependent Fis family transcriptional regulator | 0.64 | PFLU_RS06645 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.60 | PfGW456L13_1524 | | Two-component sensor CbrB: intrcellular carbon:nitrogen balance | 0.66 | PfGW456L13_4606 | | High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) | low | > 87 |
| Pseudomonas syringae pv. syringae B728a | 0.60 | Psyr_0831 | | Two-component response regulator CbrB | 0.68 | Psyr_3845 | | L-leucine-binding protein / L-valine-binding protein / L-isoleucine-binding protein | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.60 | Psyr_0831 | | Two-component response regulator CbrB | 0.68 | Psyr_3845 | | L-leucine-binding protein / L-valine-binding protein / L-isoleucine-binding protein | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.36 | DvMF_0823 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | 0.27 | DvMF_2607 | | Extracellular ligand-binding receptor (RefSeq) | low | > 51 |
| Escherichia coli Nissle 1917 | 0.36 | ECOLIN_RS23090 | | sigma-54-dependent response regulator transcription factor ZraR | 0.58 | ECOLIN_RS19775 | | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | low | > 52 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.36 | OHPLBJKB_04045 | | Transcriptional regulatory protein ZraR | 0.58 | OHPLBJKB_00245 | | Leucine-specific-binding protein | low | > 73 |
| Escherichia fergusonii Becca | 0.36 | EFB2_04606 | | Transcriptional regulatory protein ZraR | 0.58 | EFB2_00364 | | Leucine-specific-binding protein | low | > 86 |
| Escherichia coli ECOR38 | 0.36 | HEPCGN_11960 | zraR | sigma-54-dependent response regulator transcription factor ZraR | 0.58 | HEPCGN_15560 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | low | > 85 |
| Escherichia coli ECOR27 | 0.36 | NOLOHH_05465 | zraR | sigma-54-dependent response regulator transcription factor ZraR | 0.58 | NOLOHH_08535 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | low | > 57 |
| Escherichia coli BL21 | 0.35 | ECD_03881 | | fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein | 0.57 | ECD_03307 | | leucine transporter subunit | low | > 60 |
| Escherichia coli BW25113 | 0.35 | b4004 | zraR | fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein (NCBI) | 0.58 | b3458 | livK | leucine transporter subunit (NCBI) | low | > 76 |
| Escherichia coli ECRC99 | 0.35 | KEDOAH_14840 | zraR | sigma-54-dependent response regulator transcription factor ZraR | 0.58 | KEDOAH_11400 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | — | — |
| Escherichia coli ECRC101 | 0.35 | MCAODC_03820 | zraR | sigma-54-dependent response regulator transcription factor ZraR | 0.58 | MCAODC_07270 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | — | — |
| Escherichia coli ECRC102 | 0.35 | NIAGMN_11070 | zraR | sigma-54-dependent response regulator transcription factor ZraR | 0.58 | NIAGMN_14510 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | — | — |
| Klebsiella michiganensis M5al | 0.35 | BWI76_RS01605 | | transcriptional regulatory protein ZraR | 0.59 | BWI76_RS26350 | | branched chain amino acid ABC transporter substrate-binding protein | low | > 92 |
| Escherichia coli ECRC101 | 0.35 | OKFHMN_13320 | zraR | sigma-54-dependent response regulator transcription factor ZraR | 0.58 | OKFHMN_16740 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | — | — |
| Escherichia coli ECRC98 | 0.34 | JDDGAC_16945 | zraR | sigma-54-dependent response regulator transcription factor ZraR | 0.58 | JDDGAC_20370 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | — | — |
| Azospirillum brasilense Sp245 | 0.34 | AZOBR_RS18445 | | chemotaxis protein CheY | 0.36 | AZOBR_RS08260 | | L-proline and D-alanine ABC transporter, substrate-binding component (from data) | low | > 97 |
| Dinoroseobacter shibae DFL-12 | 0.28 | Dshi_0823 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | 0.13 | Dshi_1522 | | Extracellular ligand-binding receptor (RefSeq) | low | > 64 |
| Phaeobacter inhibens DSM 17395 | 0.25 | PGA1_c27610 | | transcriptional regulatory protein, containing sigma-54 interaction domain | 0.12 | PGA1_c15890 | | extracellular ligand-binding receptor | low | > 62 |
Not shown: 8 genomes with orthologs for HP15_328 only; 39 genomes with orthologs for HP15_3055 only