| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas simiae WCS417 | 1.0 | PS417_06325 | | LysR family transcriptional regulator | 1.0 | PS417_15075 | | NAD-glutamate dehydrogenase | 0.45 | 12 |
| Pseudomonas fluorescens SBW25 | 0.98 | PFLU_RS06390 | | LysR family transcriptional regulator | 0.99 | PFLU_RS17095 | | NAD-glutamate dehydrogenase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.98 | PFLU_RS06390 | | LysR family transcriptional regulator | 0.99 | PFLU_RS17095 | | NAD-glutamate dehydrogenase | low | > 109 |
| Pseudomonas sp. RS175 | 0.95 | PFR28_00419 | | HTH-type transcriptional regulator DmlR | 0.93 | PFR28_01602 | | NAD-specific glutamate dehydrogenase | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.95 | Pf6N2E2_3045 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | 0.94 | Pf6N2E2_634 | | NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.94 | Pf1N1B4_3107 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | 0.93 | Pf1N1B4_4643 | | NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.94 | AO353_16575 | | LysR family transcriptional regulator | 0.93 | AO353_22820 | | NAD-glutamate dehydrogenase | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.94 | AO356_05925 | | LysR family transcriptional regulator | 0.94 | AO356_24705 | | NAD-glutamate dehydrogenase | low | > 104 |
| Pseudomonas fluorescens GW456-L13 | 0.94 | PfGW456L13_4683 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | 0.92 | PfGW456L13_3298 | | NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form | low | > 87 |
| Pseudomonas putida KT2440 | 0.89 | PP_1615 | | Transcriptional regulator, LysR family | 0.89 | PP_2080 | | NAD-specific glutamate dehydrogenase | low | > 96 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.88 | Psyr_1366 | | transcriptional regulator, LysR family | 0.89 | Psyr_1724 | | glutamate dehydrogenase (NAD) | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.88 | Psyr_1366 | | transcriptional regulator, LysR family | 0.89 | Psyr_1724 | | glutamate dehydrogenase (NAD) | low | > 86 |
| Pseudomonas sp. S08-1 | 0.80 | OH686_18145 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | 0.81 | OH686_22265 | | NAD-specific glutamate dehydrogenase , large form | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.71 | Psest_2817 | | Transcriptional regulator | 0.73 | Psest_1944 | | NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form (from data) | low | > 67 |
| Azospirillum brasilense Sp245 | 0.67 | AZOBR_RS16520 | | LysR family transcriptional regulator | 0.42 | AZOBR_RS00190 | | L-glutamate dehydrogenase (NAD+) (EC 1.4.1.2) (from data) | low | > 97 |
| Shewanella loihica PV-4 | 0.58 | Shew_1539 | | LysR family transcriptional regulator (RefSeq) | 0.44 | Shew_1809 | | NAD-glutamate dehydrogenase (RefSeq) | low | > 60 |
| Azospirillum sp. SherDot2 | 0.57 | MPMX19_05327 | | HTH-type transcriptional regulator PgrR | 0.40 | MPMX19_04621 | | NAD-specific glutamate dehydrogenase | low | > 112 |
| Shewanella sp. ANA-3 | 0.57 | Shewana3_1836 | | LysR family transcriptional regulator (RefSeq) | 0.44 | Shewana3_1785 | | glutamate dehydrogenase (NAD) (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.56 | SO2053 | | transcriptional regulator, LysR family (NCBI ptt file) | 0.44 | SO2593 | | conserved hypothetical protein (NCBI ptt file) | low | > 76 |
| Caulobacter crescentus NA1000 | 0.54 | CCNA_02602 | | LysR-family transcriptional regulator | 0.33 | CCNA_00086 | | NAD-specific glutamate dehydrogenase GdhZ | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.54 | CCNA_02602 | | LysR-family transcriptional regulator | 0.33 | CCNA_00086 | | NAD-specific glutamate dehydrogenase GdhZ | — | — |
| Shewanella amazonensis SB2B | 0.52 | Sama_0005 | | LysR, substrate-binding (RefSeq) | 0.43 | Sama_1592 | | hypothetical protein (RefSeq) | low | > 62 |
| Alteromonas macleodii MIT1002 | 0.42 | MIT1002_03088 | | D-malate degradation protein R | 0.44 | MIT1002_02034 | | NAD-specific glutamate dehydrogenase | low | > 70 |
| Lysobacter sp. OAE881 | 0.29 | ABIE51_RS10605 | | LysR family transcriptional regulator | 0.40 | ABIE51_RS09105 | | NAD-glutamate dehydrogenase domain-containing protein | low | > 62 |