Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Marinobacter adhaerens HP15 | 1.0 | HP15_2701 | | phenylacetic acid degradation oxidoreductase PaaK | 1.0 | HP15_2694 | | phenylacetic acid degradation protein PaaD | 0.49 | 7 |
Pseudomonas fluorescens GW456-L13 | 0.72 | PfGW456L13_2423 | | Phenylacetate-CoA oxygenase/reductase, PaaK subunit | 0.58 | PfGW456L13_2431 | | Phenylacetic acid degradation protein PaaD, thioesterase | low | > 87 |
Pseudomonas putida KT2440 | 0.68 | PP_3274 | | ring 1,2-phenylacetyl-CoA epoxidase, reductase subunit | 0.58 | PP_3281 | | hydroxyphenylacetyl-CoA thioesterase | 0.40 | 16 |
Herbaspirillum seropedicae SmR1 | 0.55 | HSERO_RS20630 | | phenylacetic acid degradation protein | 0.61 | HSERO_RS20650 | | phenylacetic acid degradation protein | low | > 78 |
Azospirillum sp. SherDot2 | 0.48 | MPMX19_05774 | | 1,2-phenylacetyl-CoA epoxidase, subunit E | 0.47 | MPMX19_05778 | | Acyl-coenzyme A thioesterase PaaI | low | > 112 |
Enterobacter asburiae PDN3 | 0.47 | EX28DRAFT_1416 | | phenylacetate-CoA oxygenase/reductase, PaaK subunit | 0.46 | EX28DRAFT_1412 | | phenylacetic acid degradation protein PaaD | low | > 76 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.47 | OHPLBJKB_02319 | | 1,2-phenylacetyl-CoA epoxidase, subunit E | 0.46 | OHPLBJKB_02315 | | Acyl-coenzyme A thioesterase PaaI | low | > 73 |
Escherichia coli ECRC62 | 0.47 | BNILDI_17925 | paaE | 1,2-phenylacetyl-CoA epoxidase, subunit E | 0.46 | BNILDI_17905 | paaI | hydroxyphenylacetyl-CoA thioesterase PaaI | — | — |
Phaeobacter inhibens DSM 17395 | 0.46 | PGA1_c04040 | | phenylacetic acid degradation NADH oxidoreductase PaaE | 0.43 | PGA1_c26810 | | phenylacetic acid degradation protein PaaI | low | > 62 |
Escherichia coli ECOR27 | 0.46 | NOLOHH_19470 | paaE | 1,2-phenylacetyl-CoA epoxidase, subunit E | 0.46 | NOLOHH_19450 | paaI | hydroxyphenylacetyl-CoA thioesterase PaaI | — | — |
Dinoroseobacter shibae DFL-12 | 0.46 | Dshi_3822 | | phenylacetate-CoA oxygenase/reductase, PaaK subunit (RefSeq) | 0.44 | Dshi_3825 | | phenylacetic acid degradation protein PaaD (RefSeq) | low | > 64 |
Paraburkholderia sabiae LMG 24235 | 0.46 | QEN71_RS28415 | | 1,2-phenylacetyl-CoA epoxidase subunit PaaE | 0.48 | QEN71_RS27515 | | hydroxyphenylacetyl-CoA thioesterase PaaI | low | > 153 |
Escherichia coli BW25113 | 0.46 | b1392 | paaE | predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation (NCBI) | 0.46 | b1396 | paaI | predicted thioesterase (NCBI) | low | > 76 |
Enterobacter sp. TBS_079 | 0.45 | MPMX20_02146 | | 1,2-phenylacetyl-CoA epoxidase, subunit E | 0.45 | MPMX20_02150 | | Acyl-coenzyme A thioesterase PaaI | low | > 85 |
Paraburkholderia bryophila 376MFSha3.1 | 0.45 | H281DRAFT_05854 | | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE | 0.49 | H281DRAFT_05721 | | acyl-CoA thioesterase | 0.66 | 12 |
Cupriavidus basilensis FW507-4G11 | 0.45 | RR42_RS23745 | | phenylacetic acid degradation protein | 0.51 | RR42_RS18260 | | phenylacetic acid degradation protein | low | > 128 |
Burkholderia phytofirmans PsJN | 0.45 | BPHYT_RS18270 | | phenylacetic acid degradation protein | 0.48 | BPHYT_RS17355 | | phenylacetic acid degradation protein | low | > 109 |
Paraburkholderia graminis OAS925 | 0.45 | ABIE53_000007 | | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE | 0.48 | ABIE53_003633 | | acyl-CoA thioesterase | low | > 113 |
Klebsiella michiganensis M5al | 0.45 | BWI76_RS13110 | | phenylacetic acid degradation protein | 0.44 | BWI76_RS13130 | | phenylacetic acid degradation protein PaaD | low | > 92 |
Ralstonia sp. UNC404CL21Col | 0.44 | ABZR87_RS21240 | | 1,2-phenylacetyl-CoA epoxidase subunit PaaE | 0.51 | ABZR87_RS02105 | | hydroxyphenylacetyl-CoA thioesterase PaaI | low | > 80 |
Ralstonia solanacearum UW163 | 0.44 | UW163_RS18535 | | phenylacetate-CoA oxygenase/reductase subunit PaaK | 0.52 | UW163_RS07175 | | phenylacetic acid degradation protein PaaD | — | — |
Ralstonia solanacearum IBSBF1503 | 0.44 | RALBFv3_RS20640 | | phenylacetate-CoA oxygenase/reductase subunit PaaK | 0.52 | RALBFv3_RS06450 | | phenylacetic acid degradation protein PaaD | low | > 76 |
Rhodopseudomonas palustris CGA009 | 0.44 | TX73_019490 | | phenylacetate-CoA oxygenase/reductase subunit PaaK | 0.45 | TX73_008870 | | hydroxyphenylacetyl-CoA thioesterase PaaI | low | > 86 |
Ralstonia solanacearum GMI1000 | 0.44 | RS_RS20025 | | phenylacetate-CoA oxygenase/reductase subunit PaaK | 0.51 | RS_RS14395 | | phenylacetic acid degradation protein PaaD | low | > 80 |
Ralstonia solanacearum PSI07 | 0.43 | RPSI07_RS02150 | | phenylacetate-CoA oxygenase/reductase subunit PaaK | 0.51 | RPSI07_RS10790 | | phenylacetic acid degradation protein PaaD | low | > 81 |
Serratia liquefaciens MT49 | 0.43 | IAI46_16370 | | phenylacetate-CoA oxygenase/reductase subunit PaaK | 0.47 | IAI46_16390 | | hydroxyphenylacetyl-CoA thioesterase PaaI | low | > 86 |
Variovorax sp. SCN45 | 0.42 | GFF7351 | | 1,2-phenylacetyl-CoA epoxidase, subunit E (EC 1.14.13.149) | 0.52 | GFF6090 | | Acyl-coenzyme A thioesterase PaaD (Pse.pu.) (E. coli PaaI) | low | > 127 |
Variovorax sp. OAS795 | 0.42 | ABID97_RS22805 | | 1,2-phenylacetyl-CoA epoxidase subunit PaaE | 0.53 | ABID97_RS22775 | | hydroxyphenylacetyl-CoA thioesterase PaaI | low | > 91 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.40 | GFF1689 | | Phenylacetate-CoA oxygenase/reductase, PaaK subunit | 0.45 | GFF621 | | Phenylacetic acid degradation protein PaaD, thioesterase | low | > 90 |
Not shown: 37 genomes with orthologs for HP15_2701 only; 6 genomes with orthologs for HP15_2694 only