Conservation of cofitness between PS417_04525 and PS417_13065 in Pseudomonas simiae WCS417

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_04525 16S rRNA methyltransferase 1.0 PS417_13065 UDP pyrophosphate phosphatase 0.24 17
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS04570 class I SAM-dependent methyltransferase 0.98 PFLU_RS13705 undecaprenyl-diphosphate phosphatase low > 109
Pseudomonas fluorescens SBW25 0.98 PFLU_RS04570 class I SAM-dependent methyltransferase 0.98 PFLU_RS13705 undecaprenyl-diphosphate phosphatase low > 109
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_2953 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) 0.88 Pf1N1B4_4741 Undecaprenyl-diphosphatase (EC 3.6.1.27) low > 87
Pseudomonas fluorescens FW300-N2C3 0.90 AO356_06940 16S rRNA methyltransferase 0.88 AO356_27775 UDP pyrophosphate phosphatase low > 104
Pseudomonas sp. RS175 0.90 PFR28_03623 Ribosomal RNA small subunit methyltransferase C 0.89 PFR28_01689 Undecaprenyl-diphosphatase low > 88
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_14995 16S rRNA methyltransferase 0.92 AO353_25760 UDP pyrophosphate phosphatase low > 101
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_1616 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) 0.87 PfGW456L13_3016 Undecaprenyl-diphosphatase (EC 3.6.1.27) low > 87
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_3247 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) 0.88 Pf6N2E2_773 Undecaprenyl-diphosphatase (EC 3.6.1.27) low > 103
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_0986 16S rRNA m(2)G 1207 methyltransferase 0.88 Psyr_3008 Undecaprenyl-diphosphatase 0.36 27
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_0986 16S rRNA m(2)G 1207 methyltransferase 0.88 Psyr_3008 Undecaprenyl-diphosphatase low > 86
Pseudomonas sp. S08-1 0.77 OH686_06345 16S rRNA (guanine(1207)-N(2))-methyltransferase 0.83 OH686_00730 undecaprenyl-diphosphatase UppP — —
Pseudomonas putida KT2440 0.73 PP_0761 Ribosomal RNA small subunit methyltransferase C 0.84 PP_2862 Undecaprenyl-diphosphatase low > 96
Pseudomonas stutzeri RCH2 0.69 Psest_3224 16S RNA G1207 methylase RsmC 0.83 Psest_2113 undecaprenyl-diphosphatase UppP — —
Acinetobacter radioresistens SK82 0.45 MPMX26_02491 Ribosomal RNA small subunit methyltransferase C 0.42 MPMX26_02574 Undecaprenyl-diphosphatase low > 36
Shewanella loihica PV-4 0.32 Shew_3230 rRNA (guanine-N(2)-)-methyltransferase (RefSeq) 0.27 Shew_1004 undecaprenyl pyrophosphate phosphatase (RefSeq) low > 60
Erwinia tracheiphila SCR3 0.29 LU632_RS03750 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.41 LU632_RS20695 bacA undecaprenyl-diphosphate phosphatase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF1031 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) 0.42 GFF3171 Undecaprenyl-diphosphatase (EC 3.6.1.27) low > 78
Pantoea sp. MT58 0.28 IAI47_16375 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.40 IAI47_03080 undecaprenyl-diphosphate phosphatase low > 76
Shewanella oneidensis MR-1 0.28 SO0828 conserved hypothetical protein (NCBI ptt file) 0.50 SO4274 undecaprenol kinase, putative (NCBI ptt file) low > 76
Escherichia coli BL21 0.28 ECD_04246 16S rRNA m(2)G1207 methyltransferase, SAM-dependent 0.40 ECD_02927 undecaprenyl pyrophosphate phosphatase low > 60
Escherichia coli BW25113 0.28 b4371 rsmC 16S ribosomal RNA m2G1207 methyltransferase (NCBI) 0.40 b3057 bacA undecaprenyl pyrophosphate phosphatase (NCBI) low > 76
Serratia liquefaciens MT49 0.28 IAI46_02860 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.39 IAI46_22080 undecaprenyl-diphosphate phosphatase low > 86
Escherichia coli Nissle 1917 0.28 ECOLIN_RS25090 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.40 ECOLIN_RS17655 undecaprenyl-diphosphate phosphatase low > 52
Dickeya dadantii 3937 0.27 DDA3937_RS03190 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.36 DDA3937_RS17125 undecaprenyl-diphosphate phosphatase low > 74
Escherichia coli ECRC99 0.27 KEDOAH_16845 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.40 KEDOAH_09440 bacA undecaprenyl-diphosphate phosphatase — —
Enterobacter asburiae PDN3 0.27 EX28DRAFT_3579 16S RNA G1207 methylase RsmC 0.41 EX28DRAFT_3085 undecaprenyl-diphosphatase UppP low > 76
Escherichia coli ECOR27 0.27 NOLOHH_03620 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.40 NOLOHH_10495 bacA undecaprenyl-diphosphate phosphatase low > 57
Escherichia coli ECRC101 0.27 MCAODC_01815 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.40 MCAODC_09220 bacA undecaprenyl-diphosphate phosphatase — —
Escherichia coli ECRC98 0.27 JDDGAC_14895 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.40 JDDGAC_22340 bacA undecaprenyl-diphosphate phosphatase — —
Escherichia coli ECRC102 0.27 NIAGMN_09150 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.40 NIAGMN_16470 bacA undecaprenyl-diphosphate phosphatase — —
Escherichia coli ECRC101 0.27 OKFHMN_11300 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.40 OKFHMN_18705 bacA undecaprenyl-diphosphate phosphatase — —
Escherichia fergusonii Becca 0.27 EFB2_04076 Ribosomal RNA small subunit methyltransferase C 0.40 EFB2_00754 Undecaprenyl-diphosphatase low > 86
Escherichia coli ECOR38 0.27 HEPCGN_09305 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.40 HEPCGN_17560 bacA undecaprenyl-diphosphate phosphatase low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.27 OHPLBJKB_03691 Ribosomal RNA small subunit methyltransferase C 0.40 OHPLBJKB_00647 Undecaprenyl-diphosphatase low > 73
Klebsiella michiganensis M5al 0.27 BWI76_RS04080 16S rRNA (guanine(1207)-N(2))-methyltransferase 0.41 BWI76_RS24480 undecaprenyl-diphosphatase low > 92
Escherichia coli ECRC62 0.27 BNILDI_07980 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.40 BNILDI_01020 bacA undecaprenyl-diphosphate phosphatase — —
Enterobacter sp. TBS_079 0.27 MPMX20_00669 Ribosomal RNA small subunit methyltransferase C 0.40 MPMX20_03894 Undecaprenyl-diphosphatase low > 85
Dickeya dianthicola ME23 0.26 DZA65_RS03385 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.37 DZA65_RS18260 undecaprenyl-diphosphate phosphatase low > 75
Dickeya dianthicola 67-19 0.26 HGI48_RS03340 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.37 HGI48_RS17175 undecaprenyl-diphosphate phosphatase 0.58 64
Rahnella sp. WP5 0.26 EX31_RS04120 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.38 EX31_RS08165 undecaprenyl-diphosphate phosphatase low > 89
Pectobacterium carotovorum WPP14 0.25 HER17_RS18080 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.38 HER17_RS04015 undecaprenyl-diphosphate phosphatase low > 75

Not shown: 4 genomes with orthologs for PS417_04525 only; 48 genomes with orthologs for PS417_13065 only