| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 1.0 | GFF2454 | | Nitrogen regulatory protein P-II | 1.0 | GFF2455 | | Putative sensory histidine kinase YfhA | 0.91 | 8 |
| Escherichia coli ECOR38 | 1.00 | HEPCGN_20645 | glnB | nitrogen regulatory protein P-II | 0.93 | HEPCGN_20640 | qseF | two-component system response regulator QseF/GlrR | low | > 87 |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_19270 | glnB | nitrogen regulatory protein P-II | 0.93 | NIAGMN_19265 | qseF | two-component system response regulator QseF/GlrR | — | — |
| Escherichia coli BL21 | 1.00 | ECD_02445 | | regulatory protein P-II for glutamine synthetase | 0.93 | ECD_02446 | | response regulator regulating glmY sRNA in two-component system with sensor protein GlrK | low | > 61 |
| Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS14450 | | nitrogen regulatory protein P-II | 0.93 | ECOLIN_RS14455 | | two-component system response regulator GlrR | — | — |
| Escherichia fergusonii Becca | 1.00 | EFB2_01343 | | Nitrogen regulatory protein P-II 1 | 0.93 | EFB2_01342 | | Transcriptional regulatory protein QseF | low | > 86 |
| Escherichia coli ECRC62 | 1.00 | BNILDI_11975 | glnB | nitrogen regulatory protein P-II | 0.93 | BNILDI_11970 | qseF | two-component system response regulator QseF/GlrR | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_01154 | | Nitrogen regulatory protein P-II 1 | 0.93 | OHPLBJKB_01153 | | Transcriptional regulatory protein GlrR | low | > 73 |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_13175 | glnB | nitrogen regulatory protein P-II | 0.93 | NOLOHH_13170 | qseF | two-component system response regulator QseF/GlrR | low | > 75 |
| Escherichia coli BW25113 | 1.00 | b2553 | glnB | regulatory protein P-II for glutamine synthetase (NCBI) | 0.93 | b2554 | yfhA | predicted DNA-binding response regulator in two-component system (NCBI) | low | > 76 |
| Escherichia coli ECRC101 | 1.00 | MCAODC_12030 | glnB | nitrogen regulatory protein P-II | 0.93 | MCAODC_12025 | qseF | two-component system response regulator QseF/GlrR | 0.54 | 65 |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_06720 | glnB | nitrogen regulatory protein P-II | 0.93 | KEDOAH_06725 | qseF | two-component system response regulator QseF/GlrR | — | — |
| Escherichia coli ECRC100 | 1.00 | OKFHMN_21500 | glnB | nitrogen regulatory protein P-II | 0.93 | OKFHMN_21495 | qseF | two-component system response regulator QseF/GlrR | low | > 80 |
| Escherichia coli ECRC98 | 1.00 | JDDGAC_25165 | glnB | nitrogen regulatory protein P-II | 0.93 | JDDGAC_25160 | qseF | two-component system response regulator QseF/GlrR | low | > 86 |
| Enterobacter asburiae PDN3 | 0.99 | EX28DRAFT_0097 | | nitrogen regulatory protein P-II family | 0.93 | EX28DRAFT_0096 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | low | > 76 |
| Enterobacter sp. TBS_079 | 0.99 | MPMX20_03422 | | Nitrogen regulatory protein P-II | 0.93 | MPMX20_03423 | | Transcriptional regulatory protein QseF | low | > 85 |
| Klebsiella michiganensis M5al | 0.99 | BWI76_RS21245 | | nitrogen regulatory protein P-II | 0.92 | BWI76_RS21250 | | two-component system response regulator GlrR | low | > 92 |
| Dickeya dadantii 3937 | 0.97 | DDA3937_RS15635 | | nitrogen regulatory protein P-II | 0.88 | DDA3937_RS15640 | | two-component system response regulator GlrR | low | > 74 |
| Erwinia tracheiphila SCR3 | 0.96 | LU632_RS17925 | glnB | nitrogen regulatory protein P-II | 0.85 | LU632_RS17930 | glrR | two-component system response regulator GlrR | low | > 74 |
| Dickeya dianthicola 67-19 | 0.96 | HGI48_RS15730 | | nitrogen regulatory protein P-II | 0.87 | HGI48_RS15735 | | two-component system response regulator GlrR | low | > 71 |
| Dickeya dianthicola ME23 | 0.96 | DZA65_RS16810 | | nitrogen regulatory protein P-II | 0.88 | DZA65_RS16815 | | two-component system response regulator GlrR | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.95 | HER17_RS05930 | | nitrogen regulatory protein P-II | 0.88 | HER17_RS05925 | | two-component system response regulator GlrR | 0.74 | 50 |
| Serratia liquefaciens MT49 | 0.95 | IAI46_19450 | | nitrogen regulatory protein P-II | 0.89 | IAI46_19460 | | two-component system response regulator GlrR | low | > 86 |
| Pantoea sp. MT58 | 0.95 | IAI47_04950 | | nitrogen regulatory protein P-II | 0.85 | IAI47_04945 | | two-component system response regulator GlrR | low | > 76 |
| Rahnella sp. WP5 | 0.94 | EX31_RS20610 | | nitrogen regulatory protein P-II | 0.88 | EX31_RS20615 | | two-component system response regulator GlrR | 0.29 | 35 |
| Vibrio cholerae E7946 ATCC 55056 | 0.89 | CSW01_11410 | | nitrogen regulatory protein P-II | 0.33 | CSW01_10660 | | sigma-54-dependent Fis family transcriptional regulator | low | > 62 |
| Shewanella loihica PV-4 | 0.83 | Shew_1110 | | nitrogen regulatory protein P-II (RefSeq) | 0.36 | Shew_2341 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | low | > 60 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.82 | GFF4272 | | Nitrogen regulatory protein P-II | 0.57 | GFF610 | | Putative sensory histidine kinase YfhA | low | > 90 |
| Kangiella aquimarina DSM 16071 | 0.82 | B158DRAFT_2530 | | nitrogen regulatory protein P-II family | 0.32 | B158DRAFT_0521 | | PEP-CTERM-box response regulator transcription factor | low | > 40 |
| Dechlorosoma suillum PS | 0.81 | Dsui_1687 | | nitrogen regulatory protein PII | 0.58 | Dsui_2360 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | low | > 51 |
| Variovorax sp. OAS795 | 0.80 | ABID97_RS14850 | | P-II family nitrogen regulator | 0.58 | ABID97_RS06460 | | sigma 54-interacting transcriptional regulator | low | > 91 |
| Variovorax sp. SCN45 | 0.80 | GFF1151 | | Nitrogen regulatory protein P-II | 0.58 | GFF7323 | | Transcriptional response regulatory protein GlrR | low | > 127 |
| Alteromonas macleodii MIT1002 | 0.79 | MIT1002_02726 | | Nitrogen regulatory protein P-II | 0.63 | MIT1002_01326 | | Quorum-sensing regulator protein F | low | > 70 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.74 | A4249_RS05675 | | P-II family nitrogen regulator | 0.34 | A4249_RS04415 | | sigma-54 dependent transcriptional regulator | — | — |
| Rhizobium sp. OAE497 | 0.74 | ABIE40_RS09340 | | P-II family nitrogen regulator | 0.35 | ABIE40_RS26335 | | sigma-54 dependent transcriptional regulator | — | — |
| Azospirillum sp. SherDot2 | 0.73 | MPMX19_01554 | | Nitrogen regulatory protein P-II | 0.36 | MPMX19_04251 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | — | — |
| Azospirillum brasilense Sp245 | 0.73 | AZOBR_RS07100 | | nitrogen regulatory protein P-II 1 | 0.35 | AZOBR_RS21130 | | Fis family transcriptional regulator | — | — |
| Sinorhizobium meliloti 1021 | 0.73 | SMc00947 | | nitrogen regulatory protein PII | 0.35 | SM_b20613 | | C4-dicarboxylate transport transcriptional regulator | — | — |
| Agrobacterium fabrum C58 | 0.73 | Atu1769 | | nitrogen regulatory protein PII | 0.34 | Atu3296 | | two component response regulator for C4-dicarboxylate transport | — | — |
| Herbaspirillum seropedicae SmR1 | 0.71 | HSERO_RS09460 | | nitrogen regulatory protein P-II 1 | 0.53 | HSERO_RS23710 | | response regulator GlrR | — | — |
| Dinoroseobacter shibae DFL-12 | 0.69 | Dshi_1838 | | nitrogen regulatory protein P-II (RefSeq) | 0.29 | Dshi_1196 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.66 | DVU1232 | glnB-1 | nitrogen regulatory protein P-II (TIGR) | 0.38 | DVU0539 | | sigma-54 dependent DNA-binding response regulator (TIGR) | low | > 55 |
| Desulfovibrio vulgaris Miyazaki F | 0.66 | DvMF_0865 | | nitrogen regulatory protein P-II (RefSeq) | 0.38 | DvMF_2095 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | low | > 51 |
Not shown: 35 genomes with orthologs for GFF2454 only; 7 genomes with orthologs for GFF2455 only