Conservation of cofitness between GFF2804 and GFF2421 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF2804 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 1.0 GFF2421 Alpha-2-macroglobulin 0.44 19
Escherichia coli Nissle 1917 0.91 ECOLIN_RS07185 D-amino acid dehydrogenase 0.83 ECOLIN_RS14315 alpha2-macroglobulin — —
Escherichia coli BW25113 0.91 b1189 dadA D-amino acid dehydrogenase (quinone) DadA (EC 1.4.5.1) (from data) 0.83 b2520 yfhM hypothetical protein (NCBI) low > 76
Escherichia coli ECOR38 0.91 HEPCGN_24750 dadA D-amino acid dehydrogenase 0.84 HEPCGN_20815 yfhM alpha2-macroglobulin low > 88
Escherichia coli ECRC101 0.91 MCAODC_21880 dadA D-amino acid dehydrogenase 0.83 MCAODC_12205 yfhM alpha2-macroglobulin low > 87
Escherichia coli ECRC99 0.91 KEDOAH_25305 dadA D-amino acid dehydrogenase 0.83 KEDOAH_06545 yfhM alpha2-macroglobulin — —
Escherichia coli ECRC98 0.91 JDDGAC_06220 dadA D-amino acid dehydrogenase 0.83 JDDGAC_25350 yfhM alpha2-macroglobulin — —
Escherichia coli ECRC100 0.91 OKFHMN_28290 dadA D-amino acid dehydrogenase 0.83 OKFHMN_21675 yfhM alpha2-macroglobulin — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.91 OHPLBJKB_02500 D-amino acid dehydrogenase 0.84 OHPLBJKB_01189 putative lipoprotein YfhM low > 74
Escherichia coli ECRC62 0.91 BNILDI_18890 dadA D-amino acid dehydrogenase 0.83 BNILDI_12145 yfhM alpha2-macroglobulin low > 75
Escherichia coli BL21 0.91 ECD_01164 D-amino acid dehydrogenase 0.83 ECD_02412 bacterial alpha2-macroglobulin colonization factor ECAM; anti-host protease defense factor; periplasmic inner membrane-anchored lipoprotein low > 61
Escherichia fergusonii Becca 0.91 EFB2_02743 D-amino acid dehydrogenase 0.84 EFB2_01370 Alpha-2-macroglobulin low > 86
Escherichia coli ECOR27 0.91 NOLOHH_20725 dadA D-amino acid dehydrogenase 0.84 NOLOHH_13345 yfhM alpha2-macroglobulin low > 76
Escherichia coli ECRC102 0.91 NIAGMN_27930 dadA D-amino acid dehydrogenase 0.83 NIAGMN_19445 yfhM alpha2-macroglobulin low > 80
Enterobacter asburiae PDN3 0.91 EX28DRAFT_0766 Glycine/D-amino acid oxidases (deaminating) 0.80 EX28DRAFT_0123 Large extracellular alpha-helical protein low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_02699 D-amino acid dehydrogenase 0.80 MPMX20_03398 Alpha-2-macroglobulin 0.15 48
Klebsiella michiganensis M5al 0.90 BWI76_RS17735 D-amino acid dehydrogenase small subunit 0.79 BWI76_RS21110 hypothetical protein low > 92
Klebsiella pneumoniae MKP103 0.90 KDGMDA_25050 D-amino acid dehydrogenase 0.79 KDGMDA_28230 Alpha-2-macroglobulin family low > 95
Pantoea agglomerans CFBP13505 P0401 0.78 PagCFBP13505_RS02725 D-amino acid dehydrogenase 0.57 PagCFBP13505_RS14915 alpha-2-macroglobulin family protein low > 74
Pantoea sp. MT58 0.78 IAI47_08890 D-amino acid dehydrogenase 0.57 IAI47_05025 alpha-2-macroglobulin family protein low > 76
Rhodanobacter denitrificans MT42 0.62 LRK55_RS00360 D-amino acid dehydrogenase 0.26 LRK55_RS07375 alpha-2-macroglobulin low > 63
Rhodanobacter denitrificans FW104-10B01 0.62 LRK54_RS00590 D-amino acid dehydrogenase 0.26 LRK54_RS07640 alpha-2-macroglobulin family protein low > 59
Pseudomonas sp. S08-1 0.61 OH686_13685 D-amino acid dehydrogenase 0.51 OH686_07515 Alpha-2-macroglobulin low > 80
Rhodanobacter sp000427505 FW510-R12 0.61 LRK53_RS09560 D-amino acid dehydrogenase 0.26 LRK53_RS00870 alpha-2-macroglobulin family protein low > 59
Pseudomonas putida KT2440 0.61 PP_4434 D-amino acid dehydrogenase 1 small subunit 0.50 PP_0570 lipoprotein of unknown function low > 96
Pseudomonas segetis P6 0.61 ACVTMO_RS00040 dadA D-amino acid dehydrogenase 0.50 ACVTMO_RS20115 alpha-2-macroglobulin family protein low > 75
Pseudomonas lactucae CFBP13502 0.61 GEMAOFIL_00008 D-amino acid dehydrogenase 1 0.50 GEMAOFIL_00835 Alpha-2-macroglobulin low > 96
Pseudomonas simiae WCS417 0.61 PS417_27705 amino acid dehydrogenase 0.50 PS417_03015 hypothetical protein low > 88
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_0235 D-amino acid dehydrogenase small subunit 0.50 Psyr_4385 Alpha-2-macroglobulin, N-terminal:Alpha-2-macroglobulin, N-terminal low > 86
Pseudomonas fluorescens SBW25 0.60 PFLU_RS29380 D-amino acid dehydrogenase 0.50 PFLU_RS03095 alpha-2-macroglobulin family protein low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_0235 D-amino acid dehydrogenase small subunit 0.50 Psyr_4385 Alpha-2-macroglobulin, N-terminal:Alpha-2-macroglobulin, N-terminal low > 86
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS29380 D-amino acid dehydrogenase 0.50 PFLU_RS03095 alpha-2-macroglobulin family protein low > 109
Pseudomonas sp. BP01 0.60 JOY50_RS09125 dadA D-amino acid dehydrogenase 0.49 JOY50_RS23185 alpha-2-macroglobulin low > 84
Pseudomonas sp. SVBP6 0.60 COO64_RS01395 dadA D-amino acid dehydrogenase 0.49 COO64_RS18425 alpha-2-macroglobulin low > 93
Xanthomonas campestris pv. campestris strain 8004 0.56 Xcc-8004.4621.1 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.27 Xcc-8004.3970.1 Alpha-2-macroglobulin low > 74
Agrobacterium fabrum C58 0.56 Atu3293 D-amino acid dehydrogenase small subunit 0.17 Atu3695 hypothetical protein low > 89
Xanthobacter sp. DMC5 0.55 GFF1413 D-amino acid dehydrogenase 1 0.17 GFF4204 Alpha-2-macroglobulin — —
Azospirillum sp. SherDot2 0.54 MPMX19_06097 D-amino acid dehydrogenase 1 0.17 MPMX19_00816 Alpha-2-macroglobulin 0.36 9
Rhodospirillum rubrum S1H 0.34 Rru_A1546 FAD dependent oxidoreductase (NCBI) 0.16 Rru_A0104 Alpha-2-macroglobulin-like protein (NCBI) — —
Sinorhizobium meliloti 1021 0.15 SM_b20267 D-amino acid dehydrogenase 0.16 SM_b21298 hypothetical protein low > 103
Rhizobium sp. OAE497 0.14 ABIE40_RS03380 FAD-binding oxidoreductase 0.17 ABIE40_RS20280 alpha-2-macroglobulin family protein low > 107
Rhodopseudomonas palustris CGA009 0.13 TX73_019540 FAD-dependent oxidoreductase 0.16 TX73_013205 alpha-2-macroglobulin low > 86
Bosea sp. OAE506 0.12 ABIE41_RS05730 FAD-dependent oxidoreductase 0.16 ABIE41_RS07750 alpha-2-macroglobulin low > 77
Phaeobacter inhibens DSM 17395 0.12 PGA1_c05140 D-amino acid dehydrogenase small subunit 0.15 PGA1_c31870 alpha-2-macroglobulin family protein low > 62

Not shown: 55 genomes with orthologs for GFF2804 only; 4 genomes with orthologs for GFF2421 only