Conservation of cofitness between Psest_0953 and Psest_2329 in Pseudomonas stutzeri RCH2

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0953 iron-sulfur cluster-binding protein 1.0 Psest_2329 Transcriptional regulator 0.51 17
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_07560 (Fe-S)-binding protein 0.92 AO356_03180 CysB family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_1188 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF 0.92 Pf1N1B4_283 Cys regulon transcriptional activator CysB — —
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_05710 (Fe-S)-binding protein 0.92 AO353_19060 CysB family transcriptional regulator 0.28 25
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_5116 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF 0.92 PfGW456L13_2230 Cys regulon transcriptional activator CysB low > 87
Pseudomonas sp. RS175 0.85 PFR28_00061 Lactate utilization protein B 0.92 PFR28_00966 HTH-type transcriptional regulator CysB low > 88
Marinobacter adhaerens HP15 0.75 HP15_4089 L-lactate dehydrogenase, LutB subunit (from data) 0.78 HP15_1854 transcriptional regulator, LysR family — —
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS21285 L-lactate dehydrogenase, LutB subunit (from data) 0.44 RR42_RS12245 transcriptional regulator low > 128
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS10150 LutB/LldF family L-lactate oxidation iron-sulfur protein 0.47 QEN71_RS22570 CysB family HTH-type transcriptional regulator low > 153
Dechlorosoma suillum PS 0.40 Dsui_1583 (4Fe-4S) cluster-containing protein 0.52 Dsui_1988 transcriptional regulator — —
Ralstonia solanacearum IBSBF1503 0.37 RALBFv3_RS01605 iron-sulfur cluster-binding protein 0.44 RALBFv3_RS04610 CysB family HTH-type transcriptional regulator low > 76
Ralstonia solanacearum UW163 0.37 UW163_RS14915 iron-sulfur cluster-binding protein 0.44 UW163_RS09060 CysB family HTH-type transcriptional regulator — —
Ralstonia solanacearum PSI07 0.37 RPSI07_RS15880 iron-sulfur cluster-binding protein 0.44 RPSI07_RS17385 CysB family HTH-type transcriptional regulator low > 81
Ralstonia sp. UNC404CL21Col 0.37 ABZR87_RS13405 LutB/LldF family L-lactate oxidation iron-sulfur protein 0.45 ABZR87_RS11555 CysB family HTH-type transcriptional regulator low > 80
Paraburkholderia graminis OAS925 0.37 ABIE53_002786 L-lactate dehydrogenase complex protein LldF 0.47 ABIE53_001994 LysR family cys regulon transcriptional activator low > 113
Burkholderia phytofirmans PsJN 0.37 BPHYT_RS12805 hypothetical protein 0.47 BPHYT_RS08810 CysB family transcriptional regulator low > 109
Ralstonia solanacearum GMI1000 0.36 RS_RS08115 iron-sulfur cluster-binding protein 0.44 RS_RS12180 CysB family HTH-type transcriptional regulator low > 80
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_00473 iron-sulfur cluster-binding protein 0.47 H281DRAFT_00782 transcriptional regulator, LysR family low > 103
Escherichia coli Nissle 1917 0.36 ECOLIN_RS02005 LutB/LldF family L-lactate oxidation iron-sulfur protein 0.65 ECOLIN_RS07680 HTH-type transcriptional regulator CysB low > 52
Escherichia fergusonii Becca 0.36 EFB2_03733 Lactate utilization protein B 0.65 EFB2_02652 HTH-type transcriptional regulator CysB — —
Escherichia coli ECOR27 0.36 NOLOHH_01915 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 0.65 NOLOHH_20265 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC62 0.35 BNILDI_00040 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 0.65 BNILDI_18415 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli BL21 0.35 ECD_00263 ferridoxin-like LutB family protein; putative electron transport chain YkgEFG component 0.65 ECD_01251 N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor — —
Escherichia coli ECRC99 0.35 KEDOAH_18865 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 0.65 KEDOAH_26165 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC101 0.35 OKFHMN_09100 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 0.65 OKFHMN_02600 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC98 0.35 JDDGAC_12750 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 0.65 JDDGAC_05145 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC101 0.35 MCAODC_28325 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 0.65 MCAODC_15665 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli BW25113 0.35 b0307 ykgF predicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain (NCBI) 0.65 b1275 cysB DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding (NCBI) — —
Escherichia coli ECRC102 0.35 NIAGMN_07165 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 0.65 NIAGMN_26770 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_03375 Lactate utilization protein B 0.65 OHPLBJKB_02409 HTH-type transcriptional regulator CysB low > 73
Escherichia coli ECOR38 0.35 HEPCGN_07625 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 0.65 HEPCGN_25600 cysB HTH-type transcriptional regulator CysB — —
Dickeya dianthicola 67-19 0.34 HGI48_RS12350 iron-sulfur cluster-binding protein 0.66 HGI48_RS10540 HTH-type transcriptional regulator CysB low > 71
Dickeya dianthicola ME23 0.34 DZA65_RS12790 iron-sulfur cluster-binding protein 0.66 DZA65_RS11020 HTH-type transcriptional regulator CysB low > 75
Dickeya dadantii 3937 0.34 DDA3937_RS12260 iron-sulfur cluster-binding protein 0.66 DDA3937_RS10540 HTH-type transcriptional regulator CysB low > 74

Not shown: 14 genomes with orthologs for Psest_0953 only; 37 genomes with orthologs for Psest_2329 only