Conservation of cofitness between HP15_2512 and HP15_2221 in Marinobacter adhaerens HP15

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_2512 tRNA synthetase, class II (D, K and N) 1.0 HP15_2221 pseudouridine synthase, RluA family 0.45 16
Kangiella aquimarina DSM 16071 0.47 B158DRAFT_0986 EF-P lysine aminoacylase GenX 0.45 B158DRAFT_1770 ribosomal large subunit pseudouridine synthase C (EC 5.4.99.24) low > 40
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_03885 Elongation factor P--(R)-beta-lysine ligase 0.46 OHPLBJKB_02580 Ribosomal large subunit pseudouridine synthase C low > 73
Escherichia coli ECOR38 0.46 HEPCGN_10565 epmA elongation factor P--(R)-beta-lysine ligase 0.46 HEPCGN_23865 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.89 81
Escherichia coli ECRC101 0.46 MCAODC_02850 epmA elongation factor P--(R)-beta-lysine ligase 0.46 MCAODC_22975 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli BW25113 0.46 b4155 yjeA putative lysyl-tRNA synthetase (VIMSS) 0.46 b1086 rluC 23S rRNA pseudouridylate synthase (NCBI) low > 76
Escherichia coli ECRC101 0.46 OKFHMN_12340 epmA elongation factor P--(R)-beta-lysine ligase 0.46 OKFHMN_03615 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli Nissle 1917 0.46 ECOLIN_RS24155 elongation factor P--(R)-beta-lysine ligase 0.46 ECOLIN_RS06280 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli ECOR27 0.46 NOLOHH_04600 epmA elongation factor P--(R)-beta-lysine ligase 0.46 NOLOHH_21145 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli ECRC98 0.46 JDDGAC_15975 epmA elongation factor P--(R)-beta-lysine ligase 0.46 JDDGAC_07275 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia fergusonii Becca 0.46 EFB2_04378 Elongation factor P--(R)-beta-lysine ligase 0.46 EFB2_02889 Ribosomal large subunit pseudouridine synthase C — —
Escherichia coli ECRC102 0.46 NIAGMN_10185 epmA elongation factor P--(R)-beta-lysine ligase 0.46 NIAGMN_24215 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli BL21 0.46 ECD_04027 Elongation Factor P Lys34 lysyltransferase 0.46 ECD_01082 23S rRNA pseudouridine(955,2504,2580) synthase — —
Escherichia coli ECRC62 0.46 BNILDI_06890 epmA elongation factor P--(R)-beta-lysine ligase 0.46 BNILDI_19305 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli ECRC99 0.46 KEDOAH_15825 epmA elongation factor P--(R)-beta-lysine ligase 0.46 KEDOAH_24140 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Enterobacter sp. TBS_079 0.46 MPMX20_00438 Elongation factor P--(R)-beta-lysine ligase 0.47 MPMX20_01766 Ribosomal large subunit pseudouridine synthase C — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF1995 Translation elongation factor P Lys34:lysine transferase 0.46 GFF3366 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) — —
Enterobacter asburiae PDN3 0.46 EX28DRAFT_3356 EF-P lysine aminoacylase GenX 0.47 EX28DRAFT_1844 pseudouridine synthase, RluA family — —
Serratia liquefaciens MT49 0.46 IAI46_01555 elongation factor P--(R)-beta-lysine ligase 0.44 IAI46_09755 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Rahnella sp. WP5 0.46 EX31_RS08895 elongation factor P--(R)-beta-lysine ligase 0.46 EX31_RS24400 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Klebsiella michiganensis M5al 0.46 BWI76_RS02460 elongation factor P lysine(34) lysyltransferase 0.46 BWI76_RS11050 23S rRNA pseudouridine(955/2504/2580) synthase — —
Pectobacterium carotovorum WPP14 0.45 HER17_RS02395 elongation factor P--(R)-beta-lysine ligase 0.44 HER17_RS08615 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Dickeya dadantii 3937 0.45 DDA3937_RS18960 elongation factor P--(R)-beta-lysine ligase 0.44 DDA3937_RS13155 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 74
Dickeya dianthicola 67-19 0.44 HGI48_RS19055 elongation factor P--(R)-beta-lysine ligase 0.44 HGI48_RS13220 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 71
Dickeya dianthicola ME23 0.44 DZA65_RS20175 elongation factor P--(R)-beta-lysine ligase 0.44 DZA65_RS13690 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Pantoea sp. MT58 0.44 IAI47_17270 elongation factor P--(R)-beta-lysine ligase 0.48 IAI47_12105 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Alteromonas macleodii MIT1002 0.44 MIT1002_00683 Elongation factor P--(R)-beta-lysine ligase 0.47 MIT1002_01725 Ribosomal large subunit pseudouridine synthase C low > 70
Erwinia tracheiphila SCR3 0.43 LU632_RS01930 epmA elongation factor P--(R)-beta-lysine ligase 0.48 LU632_RS14855 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Vibrio cholerae E7946 ATCC 55056 0.42 CSW01_13420 elongation factor P--(R)-beta-lysine ligase 0.45 CSW01_10130 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 62
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS01880 EF-P lysine aminoacylase EpmA 0.35 ABZR86_RS02725 RluA family pseudouridine synthase — —
Rhodanobacter denitrificans MT42 0.37 LRK55_RS17665 EF-P lysine aminoacylase EpmA 0.37 LRK55_RS17750 RluA family pseudouridine synthase — —
Lysobacter sp. OAE881 0.37 ABIE51_RS08895 EF-P lysine aminoacylase EpmA 0.38 ABIE51_RS11800 RluA family pseudouridine synthase — —
Rhodanobacter denitrificans FW104-10B01 0.37 LRK54_RS17445 EF-P lysine aminoacylase EpmA 0.37 LRK54_RS17895 RluA family pseudouridine synthase — —
Xanthomonas campestris pv. campestris strain 8004 0.37 Xcc-8004.3305.1 Translation elongation factor P Lys34:lysine transferase 0.39 Xcc-8004.2616.1 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) — —
Rhodanobacter sp. FW510-T8 0.35 OKGIIK_07495 epmA EF-P lysine aminoacylase EpmA 0.37 OKGIIK_07405 rluA 23S rRNA pseudouridine(955/2504/2580) synthase — —
Azospirillum brasilense Sp245 0.28 AZOBR_RS10420 lysyl-tRNA synthetase 0.18 AZOBR_RS06905 pseudouridine synthase — —
Magnetospirillum magneticum AMB-1 0.28 AMB_RS06525 EF-P lysine aminoacylase GenX 0.20 AMB_RS15620 RluA family pseudouridine synthase — —
Azospirillum sp. SherDot2 0.27 MPMX19_00680 Elongation factor P--(R)-beta-lysine ligase 0.20 MPMX19_01718 Ribosomal large subunit pseudouridine synthase C low > 112
Rhodospirillum rubrum S1H 0.26 Rru_A1078 tRNA synthetase, class II (D, K and N) (NCBI) 0.21 Rru_A2659 Pseudouridine synthase, RluD (NCBI) — —
Agrobacterium fabrum C58 0.24 Atu2554 lysyl-tRNA synthetase 0.23 Atu1471 ribosomal large subunit pseudouridine synthase C — —
Rhizobium sp. OAE497 0.24 ABIE40_RS18555 EF-P lysine aminoacylase EpmA 0.22 ABIE40_RS09915 RluA family pseudouridine synthase low > 107

Not shown: 3 genomes with orthologs for HP15_2512 only; 41 genomes with orthologs for HP15_2221 only