Conservation of cofitness between Psest_3520 and Psest_2164 in Pseudomonas stutzeri RCH2

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3520 Short chain fatty acids transporter 1.0 Psest_2164 Uncharacterized conserved protein 0.22 1
Alteromonas macleodii MIT1002 0.49 MIT1002_02556 Short-chain fatty acids transporter 0.32 MIT1002_02162 LigB family dioxygenase low > 70
Shewanella loihica PV-4 0.47 Shew_3088 short chain fatty acid transporter (RefSeq) 0.25 Shew_2275 extradiol ring-cleavage dioxygenase III subunit B (RefSeq) low > 60
Shewanella oneidensis MR-1 0.47 SO1391 hypothetical Short chain fatty acid transporter (NCBI ptt file) 0.44 SO1909 conserved hypothetical protein (NCBI ptt file) low > 76
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS32605 TIGR00366 family protein 0.27 QEN71_RS27690 class III extradiol ring-cleavage dioxygenase low > 153
Shewanella sp. ANA-3 0.46 Shewana3_2982 short chain fatty acid transporter (RefSeq) 0.42 Shewana3_1685 extradiol ring-cleavage dioxygenase III subunit B (RefSeq) low > 73
Azospirillum sp. SherDot2 0.45 MPMX19_03464 Putative short-chain fatty acid transporter 0.24 MPMX19_00554 4,5-DOPA dioxygenase extradiol low > 112
Escherichia coli BL21 0.45 ECD_02150 short chain fatty acid transporter 0.24 ECD_02911 4,5- DOPA-extradiol-dioxygenase low > 60
Escherichia coli Nissle 1917 0.45 ECOLIN_RS12980 TIGR00366 family protein 0.24 ECOLIN_RS17550 4,5-DOPA dioxygenase extradiol low > 52
Escherichia coli BW25113 0.45 b2223 atoE short chain fatty acid transporter (NCBI) 0.24 b3039 ygiD predicted dioxygenase (RefSeq) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_01487 Putative short-chain fatty acid transporter 0.24 OHPLBJKB_00665 4,5-DOPA dioxygenase extradiol low > 73
Escherichia coli ECOR38 0.45 HEPCGN_22415 atoE Putative short-chain fatty acid transporter 0.24 HEPCGN_17665 ygiD 4,5-DOPA dioxygenase extradiol low > 85
Escherichia fergusonii Becca 0.45 EFB2_01632 Putative short-chain fatty acid transporter 0.23 EFB2_00767 4,5-DOPA dioxygenase extradiol low > 86
Echinicola vietnamensis KMM 6221, DSM 17526 0.31 Echvi_2530 Short chain fatty acids transporter 0.23 Echvi_4002 Uncharacterized conserved protein low > 79
Rhodospirillum rubrum S1H 0.23 Rru_A1381 Short chain fatty acid transporter (NCBI) 0.25 Rru_A0209 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B (NCBI) low > 58
Rhodanobacter denitrificans MT42 0.23 LRK55_RS11675 TIGR00366 family protein 0.26 LRK55_RS12505 class III extradiol ring-cleavage dioxygenase low > 63
Rhodanobacter sp. FW510-T8 0.23 OKGIIK_11935 atoE Short chain fatty acid transporter 0.31 OKGIIK_09710 Dioxygenase low > 52
Paraburkholderia graminis OAS925 0.22 ABIE53_002459 short-chain fatty acids transporter 0.25 ABIE53_003667 4,5-DOPA dioxygenase extradiol low > 113
Acinetobacter radioresistens SK82 0.22 MPMX26_02382 Putative short-chain fatty acid transporter 0.21 MPMX26_02302 4,5-DOPA dioxygenase extradiol low > 36
Pseudomonas fluorescens FW300-N2E3 0.21 AO353_14615 Short chain fatty acid transporter 0.28 AO353_19135 aromatic ring-opening dioxygenase LigB 0.19 58
Pseudomonas fluorescens SBW25-INTG 0.20 PFLU_RS03430 short-chain fatty acid transporter 0.26 PFLU_RS08495 dioxygenase low > 109
Pseudomonas fluorescens SBW25 0.20 PFLU_RS03430 short-chain fatty acid transporter 0.26 PFLU_RS08495 dioxygenase low > 109
Pseudomonas fluorescens GW456-L13 0.20 PfGW456L13_1556 Short chain fatty acids transporter 0.25 PfGW456L13_2248 FIG074102: hypothetical protein low > 87
Pseudomonas putida KT2440 0.20 PP_3124 putative short chain fatty acid transporter 0.26 PP_1869 4,5-DOPA-dioxygenase low > 96
Pseudomonas syringae pv. syringae B728a 0.19 Psyr_3239 Short chain fatty acid transporter 0.28 Psyr_2953 Catalytic LigB subunit of aromatic ring-opening dioxygenase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.19 Psyr_3239 Short chain fatty acid transporter 0.28 Psyr_2953 Catalytic LigB subunit of aromatic ring-opening dioxygenase low > 86
Pseudomonas sp. RS175 0.19 PFR28_03676 Putative short-chain fatty acid transporter 0.27 PFR28_00981 4,5-DOPA dioxygenase extradiol low > 88
Pseudomonas simiae WCS417 0.19 PS417_03330 Short chain fatty acid transporter 0.28 PS417_08545 aromatic ring-opening dioxygenase LigB low > 88
Pseudomonas fluorescens FW300-N2C3 0.19 AO356_16285 Short chain fatty acid transporter 0.28 AO356_03105 aromatic ring-opening dioxygenase LigB low > 104
Pseudomonas fluorescens FW300-N2E2 0.18 Pf6N2E2_5193 Short chain fatty acids transporter 0.29 Pf6N2E2_2449 FIG074102: hypothetical protein low > 103
Dyella japonica UNC79MFTsu3.2 0.18 ABZR86_RS11680 TIGR00366 family protein 0.27 ABZR86_RS08995 class III extradiol ring-cleavage dioxygenase low > 74

Not shown: 1 genomes with orthologs for Psest_3520 only; 52 genomes with orthologs for Psest_2164 only