| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Sphingobium sp. HT1-2 | 1.0 | GFF2832 | | Maltodextrin glucosidase (EC 3.2.1.20) | 1.0 | GFF2007 | | Phosphoenolpyruvate-protein phosphotransferase, nitrogen regulation associated | 0.92 | 4 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.63 | A4249_RS09955 | | alpha-amylase family glycosyl hydrolase | 0.44 | A4249_RS14485 | | phosphoenolpyruvate--protein phosphotransferase | low | > 48 |
| Caulobacter crescentus NA1000 Δfur | 0.62 | CCNA_02368 | | alpha-glucosidase | 0.44 | CCNA_00892 | | phosphoenolpyruvate-protein phosphotransferase PtsP | low | > 67 |
| Caulobacter crescentus NA1000 | 0.62 | CCNA_02368 | | alpha-glucosidase | 0.44 | CCNA_00892 | | phosphoenolpyruvate-protein phosphotransferase PtsP | low | > 66 |
| Shewanella sp. ANA-3 | 0.50 | Shewana3_2311 | | Alpha-glucosidase (EC 3.2.1.20) (from data) | 0.24 | Shewana3_3042 | | phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.49 | Shew_1889 | | alpha amylase, catalytic region (RefSeq) | 0.23 | Shew_1039 | | phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.49 | Sama_1662 | | alpha amylase, catalytic region (RefSeq) | 0.24 | Sama_0864 | | phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) | low | > 62 |
| Agrobacterium fabrum C58 | 0.49 | Atu2295 | | alpha-glucosidase | 0.43 | Atu4173 | | phosphoenolpyruvate-protein phosphotransferase | low | > 89 |
| Sinorhizobium meliloti 1021 | 0.49 | SMc01532 | | alpha-glycosylase | 0.45 | SMc02437 | | phosphoenolpyruvate phosphotransferase PTSP (enzyme I-Ntr) protein | — | — |
| Shewanella oneidensis MR-1 | 0.49 | SO2213 | | oligo-1,6-glucosidase (NCBI ptt file) | 0.24 | SO1332 | ptsP | phosphoenolpyruvate-protein phosphotransferase PtsP (NCBI ptt file) | low | > 76 |
| Rhizobium sp. OAE497 | 0.49 | ABIE40_RS03175 | | alpha-glucosidase | 0.45 | ABIE40_RS17300 | | phosphoenolpyruvate--protein phosphotransferase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.48 | Dshi_1649 | | alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) (from data) | 0.38 | Dshi_2062 | | PTSINtr with GAF domain, PtsP (RefSeq) | low | > 64 |
| Azospirillum sp. SherDot2 | 0.37 | MPMX19_04220 | | Oligo-1,6-glucosidase 1 | 0.43 | MPMX19_02675 | | Phosphoenolpyruvate-dependent phosphotransferase system | low | > 112 |
| Rhodopseudomonas palustris CGA009 | 0.36 | TX73_024730 | | alpha-amylase family glycosyl hydrolase | 0.47 | TX73_003130 | | phosphoenolpyruvate--protein phosphotransferase | low | > 86 |
| Pseudomonas sp. RS175 | 0.32 | PFR28_01852 | | Oligo-1,6-glucosidase 1 | 0.24 | PFR28_04830 | | Phosphoenolpyruvate-dependent phosphotransferase system | low | > 88 |
| Serratia liquefaciens MT49 | 0.31 | IAI46_12925 | | alpha-glucosidase | 0.23 | IAI46_20450 | | phosphoenolpyruvate--protein phosphotransferase | low | > 87 |
| Rahnella sp. WP5 | 0.30 | EX31_RS10265 | | alpha-glucosidase | 0.22 | EX31_RS13200 | | phosphoenolpyruvate--protein phosphotransferase | low | > 89 |
| Erwinia amylovora T8 | 0.28 | OLJFJH_13760 | | glucohydrolase | 0.23 | OLJFJH_09055 | | phosphoenolpyruvate--protein phosphotransferase | low | > 58 |
| Klebsiella pneumoniae MKP103 | 0.27 | KDGMDA_11430 | | alpha alpha-phosphotrehalase | 0.23 | KDGMDA_03855 | | phosphoenolpyruvate--protein phosphotransferase | 0.42 | 4 |
| Vibrio cholerae E7946 ATCC 55056 | 0.27 | CSW01_04665 | | alpha,alpha-phosphotrehalase | 0.24 | CSW01_03525 | | phosphoenolpyruvate-protein phosphotransferase PtsP | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.27 | AO353_15985 | | Alpha,alpha-phosphotrehalase (EC 3.2.1.93) (from data) | 0.24 | AO353_08465 | | phosphoenolpyruvate-protein phosphotransferase | low | > 101 |
| Pseudomonas orientalis W4I3 | 0.26 | QF045_RS25255 | | alpha,alpha-phosphotrehalase | 0.24 | QF045_RS01375 | | phosphoenolpyruvate--protein phosphotransferase | 0.68 | 43 |
| Pseudomonas fluorescens SBW25-INTG | 0.26 | PFLU_RS24710 | | alpha,alpha-phosphotrehalase | 0.24 | PFLU_RS28645 | | phosphoenolpyruvate--protein phosphotransferase | 0.32 | 89 |
| Pseudomonas fluorescens SBW25 | 0.26 | PFLU_RS24710 | | alpha,alpha-phosphotrehalase | 0.24 | PFLU_RS28645 | | phosphoenolpyruvate--protein phosphotransferase | 0.68 | 53 |
| Pseudomonas fluorescens FW300-N1B4 | 0.26 | Pf1N1B4_835 | | Trehalose-6-phosphate hydrolase (EC 3.2.1.93) | 0.24 | Pf1N1B4_2284 | | FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated | low | > 87 |
| Pseudomonas lactucae CFBP13502 | 0.26 | GEMAOFIL_04762 | | Trehalose-6-phosphate hydrolase | 0.24 | GEMAOFIL_05538 | | Phosphoenolpyruvate-dependent phosphotransferase system | low | > 96 |
| Pseudomonas simiae WCS417 | 0.26 | PS417_23045 | | Alpha,alpha-phosphotrehalase (EC 3.2.1.93) (from data) | 0.24 | PS417_26985 | | phosphoenolpyruvate-protein phosphotransferase | low | > 88 |
| Erwinia tracheiphila HP pepo 2.2 | 0.25 | IJEDHG_14045 | treC | alpha alpha-phosphotrehalase | 0.21 | IJEDHG_17120 | ptsP | phosphoenolpyruvate--protein phosphotransferase | low | > 61 |
| Erwinia tracheiphila SCR3 | 0.25 | LU632_RS20965 | | alpha,alpha-phosphotrehalase | 0.21 | LU632_RS06110 | ptsP | phosphoenolpyruvate--protein phosphotransferase | low | > 73 |
| Pseudomonas sp. DMC3 | 0.25 | GFF4322 | | Trehalose-6-phosphate hydrolase | 0.24 | GFF264 | | Phosphoenolpyruvate-dependent phosphotransferase system | low | > 89 |
Not shown: 13 genomes with orthologs for GFF2832 only; 48 genomes with orthologs for GFF2007 only