Conservation of cofitness between GFF4305 and GFF1900 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF4305 tRNA-guanine transglycosylase (EC 2.4.2.29) 1.0 GFF1900 Acetate kinase (EC 2.7.2.1) 0.82 8
Enterobacter asburiae PDN3 0.99 EX28DRAFT_2565 tRNA-guanine transglycosylase 0.98 EX28DRAFT_0313 acetate kinase low > 76
Klebsiella michiganensis M5al 0.99 BWI76_RS06300 tRNA guanosine(34) transglycosylase Tgt 0.97 BWI76_RS20235 acetate kinase — —
Enterobacter sp. TBS_079 0.99 MPMX20_00997 Queuine tRNA-ribosyltransferase 0.98 MPMX20_03226 Acetate kinase low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.98 OHPLBJKB_03270 Queuine tRNA-ribosyltransferase 0.98 OHPLBJKB_01409 Acetate kinase — —
Escherichia coli ECOR38 0.98 HEPCGN_07145 tgt tRNA guanosine(34) transglycosylase Tgt 0.98 HEPCGN_22000 ackA acetate kinase 0.79 66
Escherichia coli BW25113 0.98 b0406 tgt queuine tRNA-ribosyltransferase (NCBI) 0.98 b2296 ackA acetate kinase (NCBI) — —
Escherichia coli ECRC102 0.98 NIAGMN_06560 tgt tRNA guanosine(34) transglycosylase Tgt 0.98 NIAGMN_20565 ackA acetate kinase — —
Escherichia coli BL21 0.98 ECD_00354 tRNA-guanine transglycosylase 0.98 ECD_02221 acetate kinase A and propionate kinase 2 — —
Escherichia coli ECRC98 0.98 JDDGAC_12160 tgt tRNA guanosine(34) transglycosylase Tgt 0.98 JDDGAC_26760 ackA acetate kinase — —
Escherichia coli ECOR27 0.98 NOLOHH_01440 tgt tRNA guanosine(34) transglycosylase Tgt 0.98 NOLOHH_14415 ackA acetate kinase — —
Escherichia coli Nissle 1917 0.98 ECOLIN_RS02445 tRNA guanosine(34) transglycosylase Tgt 0.98 ECOLIN_RS13330 acetate kinase — —
Escherichia coli ECRC101 0.98 MCAODC_27730 tgt tRNA guanosine(34) transglycosylase Tgt 0.98 MCAODC_13835 ackA acetate kinase — —
Escherichia coli ECRC99 0.98 KEDOAH_19460 tgt tRNA guanosine(34) transglycosylase Tgt 0.98 KEDOAH_05400 ackA acetate kinase — —
Escherichia coli ECRC100 0.98 OKFHMN_08505 tgt tRNA guanosine(34) transglycosylase Tgt 0.98 OKFHMN_22795 ackA acetate kinase — —
Escherichia fergusonii Becca 0.98 EFB2_03651 Queuine tRNA-ribosyltransferase 0.98 EFB2_01562 Acetate kinase low > 86
Escherichia coli ECRC62 0.98 BNILDI_22855 tgt tRNA guanosine(34) transglycosylase Tgt 0.98 BNILDI_13335 ackA acetate kinase — —
Pantoea sp. MT58 0.95 IAI47_14805 tRNA guanosine(34) transglycosylase Tgt 0.90 IAI47_06325 acetate kinase low > 76
Dickeya dadantii 3937 0.93 DDA3937_RS05470 tRNA guanosine(34) transglycosylase Tgt 0.89 DDA3937_RS14380 acetate kinase low > 74
Dickeya dianthicola ME23 0.92 DZA65_RS05855 tRNA guanosine(34) transglycosylase Tgt 0.89 DZA65_RS15280 acetate kinase 0.62 38
Pectobacterium carotovorum WPP14 0.92 HER17_RS15990 tRNA guanosine(34) transglycosylase Tgt 0.85 HER17_RS07085 acetate kinase — —
Dickeya dianthicola 67-19 0.92 HGI48_RS05530 tRNA guanosine(34) transglycosylase Tgt 0.90 HGI48_RS14350 acetate kinase 0.50 63
Rahnella sp. WP5 0.92 EX31_RS22095 tRNA guanosine(34) transglycosylase Tgt 0.88 EX31_RS19480 acetate kinase low > 89
Erwinia tracheiphila SCR3 0.92 LU632_RS18500 tgt tRNA guanosine(34) transglycosylase Tgt 0.89 LU632_RS07925 ackA acetate kinase — —
Serratia liquefaciens MT49 0.92 IAI46_04840 tRNA guanosine(34) transglycosylase Tgt 0.92 IAI46_17750 acetate kinase low > 86
Shewanella loihica PV-4 0.86 Shew_2337 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.63 Shew_2393 acetate kinase (RefSeq) low > 60
Shewanella sp. ANA-3 0.85 Shewana3_1435 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.65 Shewana3_1552 acetate kinase (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.85 CSW01_03850 tRNA guanosine(34) transglycosylase Tgt 0.74 CSW01_05580 acetate kinase low > 62
Shewanella oneidensis MR-1 0.85 SO3113 tgt queuine tRNA-ribosyltransferase (NCBI ptt file) 0.65 SO2915 ackA acetate kinase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.85 Sama_2193 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.65 Sama_1495 acetate kinase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.77 MIT1002_02813 Queuine tRNA-ribosyltransferase 0.48 MIT1002_01473 Acetate kinase low > 70
Pseudomonas sp. S08-1 0.75 OH686_17430 tRNA-guanine transglycosylase 0.42 OH686_06265 acetate kinase low > 80
Pseudomonas stutzeri RCH2 0.73 Psest_1242 tRNA-guanine transglycosylase, queuosine-34-forming 0.42 Psest_3213 acetate kinase low > 67
Marinobacter adhaerens HP15 0.72 HP15_1479 queuine tRNA-ribosyltransferase 0.41 HP15_1499 acetate/propionate kinase low > 73
Acinetobacter radioresistens SK82 0.68 MPMX26_00438 Queuine tRNA-ribosyltransferase 0.39 MPMX26_00415 Acetate kinase low > 36
Rhodanobacter denitrificans FW104-10B01 0.66 LRK54_RS03130 tRNA guanosine(34) transglycosylase Tgt 0.28 LRK54_RS17415 acetate/propionate family kinase low > 59
Rhodanobacter denitrificans MT42 0.66 LRK55_RS02880 tRNA guanosine(34) transglycosylase Tgt 0.28 LRK55_RS17635 acetate/propionate family kinase low > 63
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_10000 tgt tRNA guanosine(34) transglycosylase Tgt 0.26 OKGIIK_07530 ackA acetate kinase low > 52
Variovorax sp. OAS795 0.57 ABID97_RS01595 tRNA guanosine(34) transglycosylase Tgt 0.28 ABID97_RS21845 acetate/propionate family kinase low > 91
Variovorax sp. SCN45 0.56 GFF5534 Queuine tRNA-ribosyltransferase (EC 2.4.2.29) 0.25 GFF3161 Acetate kinase (EC 2.7.2.1) — —

Not shown: 60 genomes with orthologs for GFF4305 only; 0 genomes with orthologs for GFF1900 only