Conservation of cofitness between GFF3704 and GFF1868 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF3704 Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) 1.0 GFF1868 Naphthoate synthase (EC 4.1.3.36) 0.41 8
Klebsiella michiganensis M5al 0.95 BWI76_RS26040 nitrite reductase large subunit 0.97 BWI76_RS20065 1,4-dihydroxy-2-naphthoyl-CoA synthase low > 92
Escherichia coli ECRC102 0.94 NIAGMN_14965 nirB NADPH-nitrite reductase large subunit 0.98 NIAGMN_20715 menB 1,4-dihydroxy-2-naphthoyl-CoA synthase
Escherichia coli Nissle 1917 0.94 ECOLIN_RS19270 NADPH-nitrite reductase large subunit 0.98 ECOLIN_RS13175 1,4-dihydroxy-2-naphthoyl-CoA synthase low > 52
Escherichia coli ECRC99 0.94 KEDOAH_10945 nirB NADPH-nitrite reductase large subunit 0.98 KEDOAH_05250 menB 1,4-dihydroxy-2-naphthoyl-CoA synthase
Escherichia coli ECOR27 0.94 NOLOHH_08995 nirB NADPH-nitrite reductase large subunit 0.98 NOLOHH_14570 menB 1,4-dihydroxy-2-naphthoyl-CoA synthase low > 57
Escherichia coli ECRC101 0.94 OKFHMN_17195 nirB NADPH-nitrite reductase large subunit 0.98 OKFHMN_22945 menB 1,4-dihydroxy-2-naphthoyl-CoA synthase
Escherichia coli ECRC98 0.94 JDDGAC_20825 nirB NADPH-nitrite reductase large subunit 0.98 JDDGAC_26910 menB 1,4-dihydroxy-2-naphthoyl-CoA synthase
Escherichia coli ECRC101 0.94 MCAODC_07725 nirB NADPH-nitrite reductase large subunit 0.98 MCAODC_13985 menB 1,4-dihydroxy-2-naphthoyl-CoA synthase
Escherichia fergusonii Becca 0.94 EFB2_00457 Nitrite reductase [NAD(P)H] 0.98 EFB2_01593 1,4-dihydroxy-2-naphthoyl-CoA synthase low > 86
Escherichia coli BW25113 0.94 b3365 nirB nitrite reductase, large subunit, NAD(P)H-binding (NCBI) 0.98 b2262 menB naphthoate synthase (NCBI) low > 76
Escherichia coli ECRC62 0.94 BNILDI_02525 nirB NADPH-nitrite reductase large subunit 0.98 BNILDI_13485 menB 1,4-dihydroxy-2-naphthoyl-CoA synthase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.94 OHPLBJKB_00337 Nitrite reductase [NAD(P)H] 0.98 OHPLBJKB_01448 1,4-dihydroxy-2-naphthoyl-CoA synthase low > 73
Escherichia coli BL21 0.94 ECD_03216 nitrite reductase, large subunit, NAD(P)H-binding 0.98 ECD_02189 dihydroxynaphthoic acid synthetase low > 60
Escherichia coli ECOR38 0.94 HEPCGN_16025 nirB NADPH-nitrite reductase large subunit 0.97 HEPCGN_22160 menB 1,4-dihydroxy-2-naphthoyl-CoA synthase low > 85
Enterobacter asburiae PDN3 0.94 EX28DRAFT_4162 nitrite reductase [NAD(P)H], large subunit 0.97 EX28DRAFT_0342 1,4-Dihydroxy-2-naphthoyl-CoA synthase (EC 4.1.3.36) low > 76
Enterobacter sp. TBS_079 0.94 MPMX20_04269 Nitrite reductase [NAD(P)H] 0.97 MPMX20_03198 1,4-dihydroxy-2-naphthoyl-CoA synthase low > 85
Serratia liquefaciens MT49 0.85 IAI46_23655 nitrite reductase large subunit 0.91 IAI46_17550 1,4-dihydroxy-2-naphthoyl-CoA synthase 0.46 56
Pectobacterium carotovorum WPP14 0.83 HER17_RS01845 nitrite reductase large subunit NirB 0.92 HER17_RS15545 1,4-dihydroxy-2-naphthoyl-CoA synthase low > 75
Rahnella sp. WP5 0.83 EX31_RS04670 nitrite reductase large subunit 0.93 EX31_RS19345 1,4-dihydroxy-2-naphthoyl-CoA synthase low > 89
Paraburkholderia graminis OAS925 0.64 ABIE53_002205 nitrite reductase (NADH) large subunit 0.20 ABIE53_001500 enoyl-CoA hydratase/carnithine racemase low > 113
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS31785 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) 0.43 RR42_RS23695 dihydroxynaphthoic acid synthetase low > 128
Paraburkholderia bryophila 376MFSha3.1 0.63 H281DRAFT_00967 assimilatory nitrite reductase (NAD(P)H) large subunit precursor (EC 1.7.1.4) 0.20 H281DRAFT_03491 short chain enoyl-CoA hydratase (EC 4.2.1.17)/Enoyl-CoA hydratase (EC 4.2.1.17)
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS14535 nitrite reductase 0.21 HSERO_RS20665 2,3-dehydroadipyl-CoA hydratase low > 78
Dyella japonica UNC79MFTsu3.2 0.60 ABZR86_RS03855 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) 0.17 ABZR86_RS20610 enoyl-CoA hydratase-related protein
Acinetobacter radioresistens SK82 0.60 MPMX26_01574 Nitrite reductase [NAD(P)H] 0.43 MPMX26_01932 1,4-dihydroxy-2-naphthoyl-CoA synthase
Alteromonas macleodii MIT1002 0.60 MIT1002_00698 Nitrite reductase [NAD(P)H] 0.14 MIT1002_01667 putative enoyl-CoA hydratase echA8 low > 70
Pseudomonas sp. S08-1 0.57 OH686_20575 Nitrite reductase [NAD(P)H] large subunit 0.17 OH686_00845 Methylglutaconyl-CoA hydratase low > 80
Marinobacter adhaerens HP15 0.56 HP15_3880 nitrite reductase (NAD(P)H), large subunit 0.47 HP15_4142 naphthoate synthase low > 73
Castellaniella sp019104865 MT123 0.55 ABCV34_RS06890 nitrite reductase large subunit NirB 0.42 ABCV34_RS03740 2-ketocyclohexanecarboxyl-CoA hydrolase low > 48
Echinicola vietnamensis KMM 6221, DSM 17526 0.53 Echvi_1901 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) 0.49 Echvi_2341 naphthoate synthase (dihydroxynaphthoic acid synthetase)
Mycobacterium tuberculosis H37Rv 0.45 Rv0252 Probable nitrite reductase [NAD(P)H] large subunit [FAD flavoprotein] NirB 0.41 Rv0548c Naphthoate synthase MenB (dihydroxynaphthoic acid synthetase) (DHNA synthetase)
Dechlorosoma suillum PS 0.27 Dsui_1825 NAD(P)H-dependent nitrite reductase, large subunit 0.65 Dsui_2913 dihydroxynaphthoate synthase low > 51
Variovorax sp. SCN45 0.27 GFF4734 Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) 0.44 GFF4297 2-ketocyclohexanecarboxyl-CoA hydrolase 0.36 95
Hydrogenophaga sp. GW460-11-11-14-LB1 0.27 GFF3665 Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) 0.45 GFF958 Naphthoate synthase (EC 4.1.3.36) low > 90
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_4101 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) 0.20 PfGW456L13_3388 Enoyl-CoA hydratase (EC 4.2.1.17) low > 87
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.2712.1 Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) 0.21 Xcc-8004.3347.1 Enoyl-CoA hydratase (EC 4.2.1.17)

Not shown: 32 genomes with orthologs for GFF3704 only; 19 genomes with orthologs for GFF1868 only