Conservation of cofitness between Psest_2811 and Psest_1841 in Pseudomonas stutzeri RCH2

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_2811 Uncharacterized conserved protein 1.0 Psest_1841 lipid kinase YegS 0.34 16
Pseudomonas sp. RS175 0.76 PFR28_00423 tRNA pseudouridine synthase D 0.64 PFR28_01008 putative lipid kinase YegS low > 88
Pseudomonas fluorescens FW300-N2E2 0.76 Pf6N2E2_3041 tRNA pseudouridine 13 synthase (EC 4.2.1.-) 0.64 Pf6N2E2_2419 Transcription regulator [contains diacylglycerol kinase catalytic domain] low > 103
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_3111 tRNA pseudouridine 13 synthase (EC 4.2.1.-) 0.64 Pf1N1B4_233 Transcription regulator [contains diacylglycerol kinase catalytic domain] low > 87
Pseudomonas fluorescens GW456-L13 0.75 PfGW456L13_4679 tRNA pseudouridine 13 synthase (EC 4.2.1.-) 0.62 PfGW456L13_2276 Transcription regulator [contains diacylglycerol kinase catalytic domain] low > 87
Pseudomonas fluorescens FW300-N2C3 0.75 AO356_05905 pseudouridine synthase 0.65 AO356_02970 lipid kinase low > 104
Pseudomonas simiae WCS417 0.74 PS417_06345 pseudouridine synthase 0.62 PS417_19635 lipid kinase low > 88
Pseudomonas fluorescens SBW25-INTG 0.74 PFLU_RS06410 tRNA pseudouridine(13) synthase TruD 0.61 PFLU_RS21605 lipid kinase YegS low > 109
Pseudomonas fluorescens SBW25 0.74 PFLU_RS06410 tRNA pseudouridine(13) synthase TruD 0.61 PFLU_RS21605 lipid kinase YegS low > 109
Pseudomonas putida KT2440 0.74 PP_1619 tRNA pseudouridine synthase D 0.62 PP_2125 lipid kinase low > 96
Pseudomonas sp. S08-1 0.73 OH686_18165 tRNA pseudouridine(13) synthase 0.72 OH686_21825 lipid kinase YegS low > 80
Pseudomonas syringae pv. syringae B728a 0.71 Psyr_1370 tRNA pseudouridine synthase D, TruD 0.64 Psyr_3300 Conserved hypothetical protein 147 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.71 Psyr_1370 tRNA pseudouridine synthase D, TruD 0.64 Psyr_3300 Conserved hypothetical protein 147 low > 86
Lysobacter sp. OAE881 0.36 ABIE51_RS06470 tRNA pseudouridine(13) synthase TruD 0.41 ABIE51_RS04145 lipid kinase YegS low > 62
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.3137.1 tRNA pseudouridine 13 synthase (EC 4.2.1.-) 0.48 Xcc-8004.607.1 hypothetical protein low > 74
Rahnella sp. WP5 0.31 EX31_RS07845 tRNA pseudouridine(13) synthase TruD 0.41 EX31_RS20330 lipid kinase YegS low > 89
Shewanella loihica PV-4 0.31 Shew_1209 pseudouridylate synthase (RefSeq) 0.31 Shew_3345 lipid kinase (RefSeq) low > 60
Pectobacterium carotovorum WPP14 0.30 HER17_RS04335 tRNA pseudouridine(13) synthase TruD 0.39 HER17_RS06275 lipid kinase YegS low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.29 OHPLBJKB_00988 tRNA pseudouridine synthase D 0.37 OHPLBJKB_01621 Lipid kinase YegS low > 73
Escherichia coli BL21 0.29 ECD_02595 tRNA(Glu) pseudouridine(13) synthase 0.38 ECD_02015 phosphatidylglycerol kinase, metal-dependent — —
Escherichia coli BW25113 0.29 b2745 truD tRNA pseudouridine synthase D (NCBI) 0.37 b2086 yegS hypothetical protein (NCBI) low > 76
Escherichia coli ECRC62 0.29 BNILDI_10840 truD tRNA pseudouridine(13) synthase TruD 0.38 BNILDI_14400 yegS lipid kinase YegS — —
Erwinia tracheiphila SCR3 0.29 LU632_RS06460 truD tRNA pseudouridine(13) synthase TruD 0.37 LU632_RS08660 yegS lipid kinase YegS low > 74
Pantoea sp. MT58 0.29 IAI47_04215 tRNA pseudouridine(13) synthase TruD 0.38 IAI47_06840 lipid kinase YegS low > 76
Escherichia coli Nissle 1917 0.29 ECOLIN_RS15350 tRNA pseudouridine(13) synthase TruD 0.38 ECOLIN_RS12265 lipid kinase YegS — —
Escherichia coli ECRC101 0.29 MCAODC_11000 truD tRNA pseudouridine(13) synthase TruD 0.38 MCAODC_21005 yegS lipid kinase YegS — —
Escherichia coli ECOR38 0.29 HEPCGN_19655 truD tRNA pseudouridine(13) synthase TruD 0.38 HEPCGN_02830 yegS lipid kinase YegS low > 85
Escherichia coli ECRC102 0.29 NIAGMN_18245 truD tRNA pseudouridine(13) synthase TruD 0.38 NIAGMN_22095 yegS lipid kinase YegS — —
Escherichia coli ECRC98 0.29 JDDGAC_24140 truD tRNA pseudouridine(13) synthase TruD 0.38 JDDGAC_28260 yegS lipid kinase YegS — —
Escherichia fergusonii Becca 0.29 EFB2_01165 tRNA pseudouridine synthase D 0.38 EFB2_01768 Lipid kinase YegS low > 86
Escherichia coli ECRC101 0.29 OKFHMN_20475 truD tRNA pseudouridine(13) synthase TruD 0.38 OKFHMN_24150 yegS lipid kinase YegS — —
Escherichia coli ECRC99 0.29 KEDOAH_07665 truD tRNA pseudouridine(13) synthase TruD 0.38 KEDOAH_04000 yegS lipid kinase YegS — —
Escherichia coli ECOR27 0.29 NOLOHH_12290 truD tRNA pseudouridine(13) synthase TruD 0.38 NOLOHH_15485 yegS lipid kinase YegS — —
Serratia liquefaciens MT49 0.29 IAI46_03765 tRNA pseudouridine(13) synthase TruD 0.39 IAI46_19020 lipid kinase YegS low > 86
Enterobacter sp. TBS_079 0.29 MPMX20_03631 tRNA pseudouridine synthase D 0.38 MPMX20_03070 putative lipid kinase YegS low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF4793 tRNA pseudouridine 13 synthase (EC 4.2.1.-) 0.39 GFF3840 Transcription regulator [contains diacylglycerol kinase catalytic domain] low > 78
Enterobacter asburiae PDN3 0.29 EX28DRAFT_2841 tRNA pseudouridine synthase, TruD family 0.38 EX28DRAFT_0475 lipid kinase YegS low > 76
Klebsiella michiganensis M5al 0.28 BWI76_RS22665 tRNA pseudouridine(13) synthase TruD 0.39 BWI76_RS19285 lipid kinase YegS low > 92

Not shown: 17 genomes with orthologs for Psest_2811 only; 9 genomes with orthologs for Psest_1841 only