Conservation of cofitness between PS417_26370 and PS417_08530 in Pseudomonas simiae WCS417

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_26370 RNA helicase 1.0 PS417_08530 spermidine synthase 0.41 8
Pseudomonas fluorescens SBW25 1.00 PFLU_RS28020 ATP-dependent RNA helicase DbpA 0.98 PFLU_RS08480 hypothetical protein low > 109
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS28020 ATP-dependent RNA helicase DbpA 0.98 PFLU_RS08480 hypothetical protein low > 109
Pseudomonas fluorescens FW300-N2C3 0.95 AO356_13770 ATP-dependent RNA helicase 0.93 AO356_03115 spermidine synthase low > 104
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_4673 ATP-dependent 23S rRNA helicase DbpA 0.94 Pf6N2E2_2452 Spermidine synthase (EC 2.5.1.16) low > 103
Pseudomonas sp. RS175 0.94 PFR28_04172 ATP-dependent RNA helicase DbpA 0.94 PFR28_00979 Polyamine aminopropyltransferase low > 88
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_2412 ATP-dependent 23S rRNA helicase DbpA 0.93 Pf1N1B4_268 Spermidine synthase (EC 2.5.1.16) low > 87
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_1078 ATP-dependent 23S rRNA helicase DbpA 0.93 PfGW456L13_2245 Spermidine synthase (EC 2.5.1.16) low > 87
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_07850 ATP-dependent RNA helicase 0.95 AO353_19120 spermidine synthase low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.88 Psyr_0516 ATP-dependent RNA helicase DbpA 0.90 Psyr_3621 conserved hypothetical protein low > 86
Pseudomonas syringae pv. syringae B728a 0.88 Psyr_0516 ATP-dependent RNA helicase DbpA 0.90 Psyr_3621 conserved hypothetical protein low > 86
Pseudomonas putida KT2440 0.85 PP_4952 ATP-dependent RNA helicase, specific for 23S rRNA 0.87 PP_1867 conserved protein of unknown function low > 96
Pseudomonas stutzeri RCH2 0.84 Psest_0344 Superfamily II DNA and RNA helicases 0.79 Psest_1802 Spermidine synthase low > 67
Pseudomonas sp. S08-1 0.74 OH686_14770 ATP-dependent 23S rRNA helicase DbpA 0.77 OH686_22535 Spermidine synthase-like protein low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.60 GFF5449 ATP-dependent 23S rRNA helicase DbpA 0.14 GFF746 Spermidine synthase (EC 2.5.1.16) low > 90
Ralstonia solanacearum GMI1000 0.59 RS_RS03120 ATP-dependent RNA helicase DbpA 0.14 RS_RS21065 spermidine synthase low > 80
Ralstonia sp. UNC404CL21Col 0.58 ABZR87_RS19855 ATP-dependent RNA helicase DbpA 0.13 ABZR87_RS09860 spermidine synthase low > 80
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS00295 DEAD/DEAH box helicase 0.14 RR42_RS14510 spermidine synthase low > 128
Dechlorosoma suillum PS 0.57 Dsui_2946 DNA/RNA helicase, superfamily II 0.19 Dsui_1838 spermidine synthase low > 51
Shewanella sp. ANA-3 0.53 Shewana3_3384 ATP-dependent RNA helicase DbpA (RefSeq) 0.25 Shewana3_3323 spermine synthase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.53 SO0897 dbpA ATP-dependent RNA helicase DbpA (NCBI ptt file) 0.27 SO0960 hypothetical spermidine synthase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.53 Shew_0598 ATP-dependent RNA helicase DbpA (RefSeq) 0.13 Shew_0791 spermine synthase (RefSeq) low > 60

Not shown: 46 genomes with orthologs for PS417_26370 only; 1 genomes with orthologs for PS417_08530 only