Conservation of cofitness between GFF2829 and GFF1585 in Sphingobium sp. HT1-2

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF2829 Branched-chain amino acid dehydrogenase [deaminating] (EC 1.4.1.9)(EC 1.4.1.23) 1.0 GFF1585 Valine--pyruvate aminotransferase (EC 2.6.1.66) low > 95
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_5294 Leucine dehydrogenase (EC 1.4.1.9) 0.32 Pf6N2E2_5161 Valine--pyruvate aminotransferase (EC 2.6.1.66) ## AvtA low > 103
Pseudomonas sp. RS175 0.43 PFR28_00225 Leucine dehydrogenase 0.31 PFR28_03713 Aspartate aminotransferase low > 88
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS15260 amino acid dehydrogenase 0.30 QEN71_RS03275 pyridoxal phosphate-dependent aminotransferase low > 153
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_16845 amino acid dehydrogenase 0.32 AO356_16100 aminotransferase low > 104
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS22850 amino acid dehydrogenase 0.29 RR42_RS15580 aminotransferase low > 128
Pseudomonas sp. DMC3 0.42 GFF1880 Leucine dehydrogenase 0.29 GFF4035 Aspartate aminotransferase low > 89
Pseudomonas aeruginosa PA14 0.42 IKLFDK_17550 amino acid dehydrogenase 0.30 IKLFDK_30005 pyridoxal phosphate-dependent aminotransferase low > 100
Pseudomonas sp. S08-1 0.42 OH686_07180 Branched-chain amino acid dehydrogenase [deaminating] 0.32 OH686_17285 Valine--pyruvate aminotransferase low > 80
Pseudomonas segetis P6 0.42 MPMX49_03609 Leucine dehydrogenase 0.33 MPMX49_01258 Aspartate aminotransferase low > 75
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_4958 Leucine dehydrogenase (EC 1.4.1.9) 0.31 PfGW456L13_1529 Valine--pyruvate aminotransferase (EC 2.6.1.66) low > 87
Rhodospirillum rubrum S1H 0.41 Rru_A1040 Glu/Leu/Phe/Val dehydrogenase (NCBI) 0.44 Rru_A2423 Aminotransferase, class I and II (NCBI) low > 58
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_15570 amino acid dehydrogenase 0.31 AO353_14425 aminotransferase low > 101
Pseudomonas simiae WCS417 0.41 PS417_05040 amino acid dehydrogenase 0.32 PS417_23870 aminotransferase low > 88
Pseudomonas sp. BP01 0.40 JOY50_RS15535 Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein 0.29 JOY50_RS27700 pyridoxal phosphate-dependent aminotransferase low > 84
Pseudomonas sp. SVBP6 0.40 COO64_RS03660 Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein 0.29 COO64_RS15065 pyridoxal phosphate-dependent aminotransferase low > 93
Pseudomonas fluorescens SBW25 0.40 PFLU_RS05110 Glu/Leu/Phe/Val dehydrogenase 0.32 PFLU_RS25710 pyridoxal phosphate-dependent aminotransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS05110 Glu/Leu/Phe/Val dehydrogenase 0.32 PFLU_RS25710 pyridoxal phosphate-dependent aminotransferase low > 109
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_1021 Leucine dehydrogenase (EC 1.4.1.9) 0.31 Pf1N1B4_2863 Valine--pyruvate aminotransferase (EC 2.6.1.66) low > 87
Pseudomonas putida KT2440 0.40 PP_4617 leucine dehydrogenase 0.29 PP_4692 putative aspartate/tyrosine/aromatic aminotransferase low > 96
Caulobacter crescentus NA1000 Δfur 0.40 CCNA_02164 glutamate dehydrogenase/leucine dehydrogenase 0.73 CCNA_02539 aspartate aminotransferase low > 67
Caulobacter crescentus NA1000 0.40 CCNA_02164 glutamate dehydrogenase/leucine dehydrogenase 0.73 CCNA_02539 aspartate aminotransferase low > 66
Pseudomonas lactucae CFBP13502 0.38 GEMAOFIL_01215 Leucine dehydrogenase 0.32 GEMAOFIL_04925 Aspartate aminotransferase low > 93
Azospirillum brasilense Sp245 0.38 AZOBR_RS31975 amino acid dehydrogenase 0.49 AZOBR_RS11880 1-aminocyclopropane-1-carboxylate deaminase low > 97
Alteromonas macleodii MIT1002 0.36 MIT1002_01151 Leucine dehydrogenase 0.29 MIT1002_02344 Putative N-acetyl-LL-diaminopimelate aminotransferase low > 70
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.3645.1 Leucine dehydrogenase (EC 1.4.1.9) 0.29 Xcc-8004.841.1 Valine--pyruvate aminotransferase (EC 2.6.1.66) low > 74
Pseudomonas stutzeri RCH2 0.35 Psest_3516 Leucine dehydrogenase (EC 1.4.1.9) (from data) 0.29 Psest_1004 Aspartate/tyrosine/aromatic aminotransferase low > 67
Phaeobacter inhibens DSM 17395 0.32 PGA1_c20500 leucine dehydrogenase Ldh 0.43 PGA1_c20300 aminotransferase low > 62

Not shown: 19 genomes with orthologs for GFF2829 only; 32 genomes with orthologs for GFF1585 only