Conservation of cofitness between HP15_3376 and HP15_1286 in Marinobacter adhaerens HP15

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_3376 RNA polymerase-associated protein RapA 1.0 HP15_1286 SoxR-reducing system protein RsxE 0.87 3
Pseudomonas stutzeri RCH2 0.43 Psest_1327 Superfamily II DNA/RNA helicases, SNF2 family 0.60 Psest_3117 electron transport complex, RnfABCDGE type, E subunit low > 67
Pseudomonas fluorescens FW300-N2C3 0.42 AO356_04975 RNA polymerase-associated protein RapA 0.13 AO356_18350 NADH:quinone oxidoreductase low > 104
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_2845 RNA polymerase associated protein RapA (EC 3.6.1.-) 0.13 Pf6N2E2_5595 Electron transport complex protein RnfE low > 103
Pseudomonas sp. RS175 0.42 PFR28_00612 RNA polymerase-associated protein RapA 0.11 PFR28_03348 Ion-translocating oxidoreductase complex subunit E low > 88
Vibrio cholerae E7946 ATCC 55056 0.42 CSW01_12705 RNA polymerase-associated protein RapA 0.54 CSW01_05150 electron transport complex subunit E — —
Pectobacterium carotovorum WPP14 0.42 HER17_RS02990 RNA polymerase-associated protein RapA 0.47 HER17_RS10855 electron transport complex subunit E low > 75
Erwinia tracheiphila SCR3 0.41 LU632_RS02805 rapA RNA polymerase-associated protein RapA 0.46 LU632_RS11310 electron transport complex subunit E — —
Pantoea sp. MT58 0.41 IAI47_16055 RNA polymerase-associated protein RapA 0.39 IAI47_10470 electron transport complex subunit E low > 76
Enterobacter sp. TBS_079 0.41 MPMX20_00753 RNA polymerase-associated protein RapA 0.40 MPMX20_02006 Ion-translocating oxidoreductase complex subunit E low > 85
Klebsiella michiganensis M5al 0.41 BWI76_RS04570 RNA polymerase-associated protein RapA 0.39 BWI76_RS16380 electron transport complex subunit RsxE — —
Enterobacter asburiae PDN3 0.41 EX28DRAFT_3651 Superfamily II DNA/RNA helicases, SNF2 family 0.40 EX28DRAFT_1628 electron transport complex, RnfABCDGE type, E subunit low > 76
Serratia liquefaciens MT49 0.41 IAI46_03275 RNA polymerase-associated protein RapA 0.37 IAI46_11460 electron transport complex subunit E low > 86
Shewanella loihica PV-4 0.40 Shew_0457 ATP-dependent helicase HepA (RefSeq) 0.54 Shew_2071 SoxR-reducing system protein RsxE (RefSeq) — —
Shewanella sp. ANA-3 0.40 Shewana3_0574 ATP-dependent helicase HepA (RefSeq) 0.52 Shewana3_2173 electron transport complex RsxE subunit (RefSeq) — —
Escherichia fergusonii Becca 0.40 EFB2_03986 RNA polymerase-associated protein RapA 0.40 EFB2_02360 Ion-translocating oxidoreductase complex subunit E low > 86
Shewanella amazonensis SB2B 0.40 Sama_3131 ATP-dependent helicase HepA (RefSeq) 0.51 Sama_1835 electron transport complex RsxE subunit (RefSeq) — —
Escherichia coli Nissle 1917 0.40 ECOLIN_RS00315 RNA polymerase-associated protein RapA 0.40 ECOLIN_RS09105 electron transport complex subunit RsxE — —
Escherichia coli BW25113 0.40 b0059 hepA ATP-dependent helicase HepA (NCBI) 0.39 b1632 rsxE NADH-ubiquinone oxidoreductase (NCBI) low > 76
Escherichia coli ECOR27 0.40 NOLOHH_03145 rapA RNA polymerase-associated protein RapA 0.39 NOLOHH_18050 rsxE electron transport complex subunit RsxE — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_03599 RNA polymerase-associated protein RapA 0.39 OHPLBJKB_02094 Electron transport complex subunit RsxE low > 73
Escherichia coli ECRC102 0.40 NIAGMN_08650 rapA RNA polymerase-associated protein RapA 0.40 NIAGMN_00535 rsxE electron transport complex subunit RsxE — —
Escherichia coli BL21 0.40 ECD_00061 RNA polymerase remodeling/recycling factor ATPase; RNA polymerase-associated, ATP-dependent RNA translocase 0.39 ECD_01602 SoxR iron-sulfur cluster reduction factor component; electron transport inner membrane NADH-quinone reductase — —
Escherichia coli ECRC101 0.40 OKFHMN_10800 rapA RNA polymerase-associated protein RapA 0.40 OKFHMN_27530 rsxE electron transport complex subunit RsxE — —
Escherichia coli ECRC99 0.40 KEDOAH_17355 rapA RNA polymerase-associated protein RapA 0.40 KEDOAH_00575 rsxE electron transport complex subunit RsxE — —
Escherichia coli ECRC62 0.40 BNILDI_08460 rapA RNA polymerase-associated protein RapA 0.40 BNILDI_16840 rsxE electron transport complex subunit RsxE — —
Escherichia coli ECOR38 0.40 HEPCGN_08790 rapA RNA polymerase-associated protein RapA 0.38 HEPCGN_05915 rsxE electron transport complex subunit RsxE low > 85
Escherichia coli ECRC101 0.40 MCAODC_01315 rapA RNA polymerase-associated protein RapA 0.40 MCAODC_17880 rsxE electron transport complex subunit RsxE — —
Escherichia coli ECRC98 0.40 JDDGAC_14395 rapA RNA polymerase-associated protein RapA 0.40 JDDGAC_02120 rsxE electron transport complex subunit RsxE — —
Shewanella oneidensis MR-1 0.40 SO0575 hepA RNA polymerase-associated protein HepA (NCBI ptt file) 0.52 SO2513 NqrDE/RnfAE family protein (NCBI ptt file) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF183 RNA polymerase associated protein RapA (EC 3.6.1.-) 0.41 GFF3642 Electron transport complex protein RnfE low > 78
Rahnella sp. WP5 0.40 EX31_RS03745 RNA polymerase-associated protein RapA 0.42 EX31_RS06595 electron transport complex subunit E low > 89
Dickeya dadantii 3937 0.40 DDA3937_RS18235 RNA polymerase-associated protein RapA 0.45 DDA3937_RS10550 electron transport complex subunit E — —
Dickeya dianthicola 67-19 0.40 HGI48_RS18170 RNA polymerase-associated protein RapA 0.46 HGI48_RS10550 electron transport complex subunit E low > 71
Dickeya dianthicola ME23 0.40 DZA65_RS19310 RNA polymerase-associated protein RapA 0.45 DZA65_RS11030 electron transport complex subunit E low > 75
Alteromonas macleodii MIT1002 0.39 MIT1002_00659 RNA polymerase-associated protein RapA 0.57 MIT1002_01252 Electron transport complex protein RnfE — —

Not shown: 15 genomes with orthologs for HP15_3376 only; 11 genomes with orthologs for HP15_1286 only