Conservation of cofitness between PS417_28315 and PS417_06165 in Pseudomonas simiae WCS417

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_28315 zinc ABC transporter permease 1.0 PS417_06165 thiamine biosynthesis protein ThiF 0.14 13
Pseudomonas fluorescens SBW25 0.99 PFLU_RS29980 metal ABC transporter permease 0.99 PFLU_RS06230 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS29980 metal ABC transporter permease 0.99 PFLU_RS06230 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 109
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_709 Zinc ABC transporter, inner membrane permease protein ZnuB 0.95 PfGW456L13_4719 HesA/MoeB/ThiF family protein related to EC-YgdL low > 87
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_1988 Zinc ABC transporter, inner membrane permease protein ZnuB 0.95 Pf1N1B4_3074 HesA/MoeB/ThiF family protein related to EC-YgdL low > 87
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_4260 Zinc ABC transporter, inner membrane permease protein ZnuB 0.95 Pf6N2E2_3081 HesA/MoeB/ThiF family protein related to EC-YgdL low > 103
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_10135 zinc ABC transporter permease 0.94 AO353_16420 thiamine biosynthesis protein ThiF low > 101
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_11925 zinc ABC transporter permease 0.95 AO356_06085 thiamine biosynthesis protein ThiF low > 104
Pseudomonas sp. RS175 0.74 PFR28_04536 Manganese transport system membrane protein MntC 0.95 PFR28_00387 tRNA threonylcarbamoyladenosine dehydratase low > 88
Pseudomonas stutzeri RCH2 0.67 Psest_1206 ABC-type Mn2+/Zn2+ transport systems, permease components 0.77 Psest_1619 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 low > 67
Erwinia tracheiphila SCR3 0.50 LU632_RS18230 metal ABC transporter permease 0.53 LU632_RS06230 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 74
Pantoea sp. MT58 0.49 IAI47_14535 metal ABC transporter permease 0.53 IAI47_04005 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 76
Pectobacterium carotovorum WPP14 0.48 HER17_RS03475 metal ABC transporter permease 0.52 HER17_RS16435 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 75
Dickeya dianthicola ME23 0.47 DZA65_RS18900 metal ABC transporter permease 0.51 DZA65_RS05375 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 75
Escherichia fergusonii Becca 0.47 EFB2_00094 Manganese transport system membrane protein MntB 0.53 EFB2_01105 tRNA threonylcarbamoyladenosine dehydratase 0.29 27
Dickeya dadantii 3937 0.47 DDA3937_RS17770 metal ABC transporter permease 0.53 DDA3937_RS05030 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 74
Dickeya dianthicola 67-19 0.47 HGI48_RS17755 metal ABC transporter permease 0.51 HGI48_RS05035 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.55 26
Rahnella sp. WP5 0.46 EX31_RS22450 metal ABC transporter permease 0.51 EX31_RS13130 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 89
Serratia liquefaciens MT49 0.46 IAI46_05165 metal ABC transporter permease 0.52 IAI46_20360 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 86
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF5750 Zinc ABC transporter, inner membrane permease protein ZnuB 0.30 GFF4538 Probable HesA/MoeB/ThiF family protein low > 90
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_2367 ABC-3 0.86 Psyr_1333 UBA/THIF-type NAD/FAD binding fold protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_2367 ABC-3 0.86 Psyr_1333 UBA/THIF-type NAD/FAD binding fold protein low > 86
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS15875 zinc ABC transporter permease 0.39 HSERO_RS06230 heme biosynthesis protein HemY low > 78
Klebsiella michiganensis M5al 0.41 BWI76_RS22200 iron ABC transporter 0.50 BWI76_RS22975 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 92
Enterobacter sp. TBS_079 0.40 MPMX20_03583 Manganese transport system membrane protein MntB 0.50 MPMX20_03675 tRNA threonylcarbamoyladenosine dehydratase low > 85
Enterobacter asburiae PDN3 0.40 EX28DRAFT_2788 ABC-type Mn2+/Zn2+ transport systems, permease components 0.50 EX28DRAFT_2888 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 low > 76
Castellaniella sp019104865 MT123 0.37 ABCV34_RS13445 metal ABC transporter permease 0.29 ABCV34_RS00665 tRNA threonylcarbamoyladenosine dehydratase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.18 GFF4729 Manganese ABC transporter, inner membrane permease protein SitC 0.53 GFF4870 CsdL (EC-YgdL) protein of the HesA/MoeB/ThiF family, part of the CsdA-E-L sulfur transfer pathway low > 78
Escherichia coli ECOR27 0.18 NOLOHH_19575 sitC iron/manganese ABC transporter permease subunit SitC 0.53 NOLOHH_11975 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA — —
Escherichia coli Nissle 1917 0.18 ECOLIN_RS06990 iron/manganese ABC transporter permease subunit SitC 0.53 ECOLIN_RS15670 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 52
Fusobacterium nucleatum SB010 0.15 HUW76_06325 metal ABC transporter permease 0.22 HUW76_04475 tRNA threonylcarbamoyladenosine dehydratase low > 35

Not shown: 7 genomes with orthologs for PS417_28315 only; 42 genomes with orthologs for PS417_06165 only