Conservation of cofitness between GFF2829 and GFF1185 in Sphingobium sp. HT1-2

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF2829 Branched-chain amino acid dehydrogenase [deaminating] (EC 1.4.1.9)(EC 1.4.1.23) 1.0 GFF1185 Nitrate transporter NasA low > 95
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_5294 Leucine dehydrogenase (EC 1.4.1.9) 0.59 Pf6N2E2_2376 nitrate transporter (from data) low > 103
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS15260 amino acid dehydrogenase 0.18 QEN71_RS10450 nitrate/nitrite transporter low > 153
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_16845 amino acid dehydrogenase 0.59 AO356_02760 MFS transporter low > 104
Pseudomonas sp. RS175 0.43 PFR28_00225 Leucine dehydrogenase 0.59 PFR28_01051 Nitrate transporter low > 88
Pseudomonas sp. DMC3 0.42 GFF1880 Leucine dehydrogenase 0.59 GFF5249 Nitrate transporter low > 89
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS22850 amino acid dehydrogenase 0.16 RR42_RS08830 MFS transporter low > 128
Pseudomonas aeruginosa PA14 0.42 IKLFDK_17550 amino acid dehydrogenase 0.55 IKLFDK_08625 MFS transporter low > 100
Pseudomonas sp. S08-1 0.42 OH686_07180 Branched-chain amino acid dehydrogenase [deaminating] 0.55 OH686_00515 Nitrate transporter NasA low > 80
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_4958 Leucine dehydrogenase (EC 1.4.1.9) 0.59 PfGW456L13_4099 Nitrate/nitrite transporter low > 87
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_15570 amino acid dehydrogenase 0.58 AO353_00795 MFS transporter low > 101
Pseudomonas simiae WCS417 0.41 PS417_05040 amino acid dehydrogenase 0.57 PS417_20970 MFS transporter low > 88
Pseudomonas sp. BP01 0.40 JOY50_RS15535 Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein 0.53 JOY50_RS22120 NarK/NasA family nitrate transporter 0.32 60
Pseudomonas sp. SVBP6 0.40 COO64_RS03660 Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein 0.58 COO64_RS05320 NarK/NasA family nitrate transporter low > 93
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS05110 Glu/Leu/Phe/Val dehydrogenase 0.57 PFLU_RS22580 NarK/NasA family nitrate transporter low > 109
Pseudomonas fluorescens SBW25 0.40 PFLU_RS05110 Glu/Leu/Phe/Val dehydrogenase 0.57 PFLU_RS22580 NarK/NasA family nitrate transporter low > 109
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_1021 Leucine dehydrogenase (EC 1.4.1.9) 0.60 Pf1N1B4_3839 Nitrate/nitrite transporter low > 87
Pseudomonas putida KT2440 0.40 PP_4617 leucine dehydrogenase 0.56 PP_2092 Nitrate transporter low > 96
Caulobacter crescentus NA1000 Δfur 0.40 CCNA_02164 glutamate dehydrogenase/leucine dehydrogenase 0.61 CCNA_00650 MFS superfamily nitrate/nitrite transporter NarK low > 67
Caulobacter crescentus NA1000 0.40 CCNA_02164 glutamate dehydrogenase/leucine dehydrogenase 0.61 CCNA_00650 nitrate transporter (from data) low > 66
Pseudomonas lactucae CFBP13502 0.38 GEMAOFIL_01215 Leucine dehydrogenase 0.57 GEMAOFIL_04339 Nitrate transporter low > 93
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.3645.1 Leucine dehydrogenase (EC 1.4.1.9) 0.52 Xcc-8004.2713.1 Nitrate/nitrite transporter low > 74
Rhodanobacter sp. FW510-T8 0.35 OKGIIK_04050 gdhA leucine dehydrogenase 0.16 OKGIIK_05325 MFS transporter low > 53
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS15285 Glu/Leu/Phe/Val dehydrogenase 0.16 LRK54_RS14015 NarK/NasA family nitrate transporter low > 59
Pseudomonas stutzeri RCH2 0.35 Psest_3516 Leucine dehydrogenase (EC 1.4.1.9) (from data) 0.60 Psest_1932 nitrite extrusion protein (nitrite facilitator) low > 67
Rhodanobacter denitrificans MT42 0.35 LRK55_RS15000 Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein 0.16 LRK55_RS13735 nitrate/nitrite transporter low > 63
Rhodanobacter sp000427505 FW510-R12 0.35 LRK53_RS13350 Glu/Leu/Phe/Val dehydrogenase 0.16 LRK53_RS14595 NarK/NasA family nitrate transporter low > 59
Pedobacter sp. GW460-11-11-14-LB5 0.33 CA265_RS13255 leucine dehydrogenase 0.08 CA265_RS10010 MFS transporter low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.30 ABZR88_RS14125 Glu/Leu/Phe/Val dehydrogenase 0.09 ABZR88_RS16930 MFS transporter low > 71

Not shown: 18 genomes with orthologs for GFF2829 only; 42 genomes with orthologs for GFF1185 only