| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas simiae WCS417 | 1.0 | PS417_24265 | | ABC transporter ATP-binding protein | 1.0 | PS417_05990 | | diguanylate cyclase | 0.30 | 16 |
| Pseudomonas fluorescens SBW25-INTG | 0.99 | PFLU_RS26180 | | energy-dependent translational throttle protein EttA | 0.98 | PFLU_RS06060 | | diguanylate cyclase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.99 | PFLU_RS26180 | | energy-dependent translational throttle protein EttA | 0.98 | PFLU_RS06060 | | diguanylate cyclase | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.98 | PfGW456L13_1453 | | Glutathione-regulated potassium-efflux system ATP-binding protein | 0.91 | PfGW456L13_4751 | | diguanylate cyclase (GGDEF domain) with PAS/PAC sensor | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.98 | AO353_14030 | | ABC transporter ATP-binding protein | 0.90 | AO353_04215 | | diguanylate cyclase | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.98 | Pf6N2E2_5084 | | Glutathione-regulated potassium-efflux system ATP-binding protein | 0.89 | Pf6N2E2_3117 | | diguanylate cyclase (GGDEF domain) with PAS/PAC sensor | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.98 | AO356_15735 | | ABC transporter ATP-binding protein | 0.90 | AO356_06245 | | diguanylate cyclase | low | > 104 |
| Pseudomonas sp. RS175 | 0.98 | PFR28_03784 | | Energy-dependent translational throttle protein EttA | 0.89 | PFR28_00357 | | Protein-glutamate methylesterase/protein-glutamine glutaminase | low | > 88 |
| Pseudomonas putida KT2440 | 0.96 | PP_0674 | | ADP/ATP ratio sensor and inhibitor of translation | 0.84 | PP_1494 | | Response regulator/GGDEF domain protein | low | > 96 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.96 | Psyr_4264 | | ABC transporter | 0.84 | Psyr_1309 | | response regulator receiver modulated diguanylate cyclase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.96 | Psyr_4264 | | ABC transporter | 0.84 | Psyr_1309 | | response regulator receiver modulated diguanylate cyclase | low | > 86 |
| Pseudomonas sp. S08-1 | 0.93 | OH686_16240 | | Energy-dependent translational throttle protein EttA | 0.68 | OH686_14445 | | diguanylate cyclase (GGDEF domain) with PAS/PAC sensor | low | > 80 |
| Paraburkholderia sabiae LMG 24235 | 0.75 | QEN71_RS27625 | | energy-dependent translational throttle protein EttA | 0.61 | QEN71_RS10075 | | diguanylate cyclase | low | > 153 |
| Ralstonia sp. UNC404CL21Col | 0.75 | ABZR87_RS02310 | | energy-dependent translational throttle protein EttA | 0.60 | ABZR87_RS23355 | | diguanylate cyclase | low | > 80 |
| Burkholderia phytofirmans PsJN | 0.75 | BPHYT_RS17480 | | ABC transporter ATP-binding protein | 0.62 | BPHYT_RS19780 | | diguanylate cyclase | low | > 109 |
| Ralstonia solanacearum PSI07 | 0.75 | RPSI07_RS10585 | | energy-dependent translational throttle protein EttA | 0.60 | RPSI07_RS07710 | | diguanylate cyclase response regulator | low | > 81 |
| Shewanella sp. ANA-3 | 0.74 | Shewana3_1093 | | putative ABC transporter ATP-binding protein (RefSeq) | 0.28 | Shewana3_4015 | | response regulator receiver modulated diguanylate cyclase (RefSeq) | low | > 73 |
| Herbaspirillum seropedicae SmR1 | 0.74 | HSERO_RS23550 | | ABC transporter ATP-binding protein | 0.58 | HSERO_RS15135 | | diguanylate cyclase | low | > 78 |
| Shewanella amazonensis SB2B | 0.73 | Sama_1013 | | putative ABC transporter ATP-binding protein (RefSeq) | 0.27 | Sama_0748 | | response regulator receiver protein (RefSeq) | low | > 62 |
| Dechlorosoma suillum PS | 0.73 | Dsui_2746 | | ATP-binding cassette protein, ChvD family | 0.30 | Dsui_2486 | | diguanylate cyclase (GGDEF) domain-containing protein | low | > 51 |
| Cupriavidus basilensis FW507-4G11 | 0.72 | RR42_RS18575 | | ABC transporter ATP-binding protein | 0.68 | RR42_RS34850 | | diguanylate cyclase | low | > 128 |
| Acidovorax sp. GW101-3H11 | 0.71 | Ac3H11_387 | | ABC transporter ATP-binding protein | 0.26 | Ac3H11_1559 | | Response regulator | — | — |
| Alteromonas macleodii MIT1002 | 0.71 | MIT1002_02704 | | putative ABC transporter ATP-binding protein | 0.24 | MIT1002_03504 | | Stalked cell differentiation-controlling protein | low | > 70 |
| Azospirillum sp. SherDot2 | 0.57 | MPMX19_00626 | | Energy-dependent translational throttle protein EttA | 0.29 | MPMX19_02025 | | Protein-glutamate methylesterase/protein-glutamine glutaminase | low | > 112 |
| Azospirillum brasilense Sp245 | 0.57 | AZOBR_RS09515 | | heme ABC transporter ATP-binding protein | 0.29 | AZOBR_RS03050 | | diguanylate cyclase | 0.53 | 8 |